Gene Anae109_1506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_1506 
Symbol 
ID5374678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp1709035 
End bp1709691 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content70% 
IMG OID640843017 
Product3-oxoacid CoA-transferase, B subunit 
Protein accessionYP_001378697 
Protein GI153004372 
COG category[I] Lipid transport and metabolism 
COG ID[COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit 
TIGRFAM ID[TIGR02428] 3-oxoacid CoA-transferase, B subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.233777 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTCA CCCGCGAGCA GATCGCCACC CGCGTCGCGA GGGAGCTCCG CGACGGTTTC 
TACGTGAACC TCGGCATCGG CATGCCGACC CTCGTGTCCA ACTACGTGCC GGCGGGGATC
GAGGTGGTGC TGCAGTCCGA GAACGGCATC CTCGGGGTCG GTCCCTATCC CTACGACGGC
GACGAGGACC CGGACCTCAT CAACGCCGGC AAGGAGACGG TGACGGTGCT CCCCGGCGCC
GCGTTCTTCT CCTCCGCGGA GTCGTTCGCC ATGATCCGCG GCGGCCACGT CGACCTCGCC
ATCCTCGGCG CGCTCGAGGT GTCGGAGCGC GGCGATCTCG CGAACTGGCT CGTGCCCGGG
AAGATGGTGA AGGGCATGGG TGGCGGGATG GACCTCGTCG CGGGCGCGAA GCGGGTGGTG
GTGATGATGG ACCACGCCAC GAAGGACGGG CGCCCGAAGA TCCTGAAGCA GTGCACGCTG
CCCCTCACCG GCCGCCGCTG CGTCTCGGCC ATCTGCTCCG ACCGCGCCTG GATCGACGTG
TCCCAGGACG GGCTCGTCCT GCGCGAGCTC GCGCCGGGGG AGACGGTCGC GTCCGTGCAG
GAGCTCACCG AGGCGAAGCT CATCGTCGCG CCCGACGTGA GGACGATGCA GGTCTGA
 
Protein sequence
MPLTREQIAT RVARELRDGF YVNLGIGMPT LVSNYVPAGI EVVLQSENGI LGVGPYPYDG 
DEDPDLINAG KETVTVLPGA AFFSSAESFA MIRGGHVDLA ILGALEVSER GDLANWLVPG
KMVKGMGGGM DLVAGAKRVV VMMDHATKDG RPKILKQCTL PLTGRRCVSA ICSDRAWIDV
SQDGLVLREL APGETVASVQ ELTEAKLIVA PDVRTMQV