| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_0871 |
|---|
| Symbol | |
|---|
| ID | 5375425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | - |
|---|
| Start bp | 997540 |
|---|
| End bp | 998280 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 81% |
|---|
| IMG OID | 640842378 |
|---|
| Product | TonB family protein |
|---|
| Protein accession | YP_001378064 |
|---|
| Protein GI | 153003739 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
|---|
| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 0.286115 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCTCAC CTCCCTCCGA CGGCTCGCCG CGGGCGCGCA CGCTCGCGGC GATGGCGGTG
GCCTCGCTCG CCATCCACGC CGGCGGCTTC GCCTGGGCGG CGCGGCTGGA GGCGCGCCCC
GCCGCGAGGC CCGCGCCGGT GGTGGTCGAG TTCGAGGCCG CCCCCCCGCC CCCCGCCCCG
GTCGTGCCCC GTCCTCCCGC GGCGCCGCCG GCGCCGCGCC GCGTGGCGAT CTCGAGGCTG
CCCCCGCCGC CCGCGGACCC GCCCCCACCG CCTCCGCCGA ACGAGCCGCC ACCGCCCGCC
GCCCCCGCGG CGCGCGCGGT CCCGCGCGTC GGCGTGTCGC TCTCGTCGAC CACCACCGGC
GGCGCCTTCG CGGTGGGCGT CGGGAACACG CTCCACGGCA GGGCGTCCGA GATCGCCGCC
GATCCGGAGG CGGTGAGGCC CTACTCCGCC CCGCGGACCT CGCCCGCCCG GCTCTCCGCG
CAGCCGCGCC TGCTCGAGCG GCCGGAGATC CCGTACCCCG CGGACGCGCG GCGGGACGGG
CTCGAGGGGC AGGTCGTGCT GCTCCTGCGG ATCGACGCGG AGGGCCGCGT CGCCGCGGCG
CGCCTGCTCT CCGCGCCGGG CCCCGCCCTG GGGGAGGCCG CCCGCGCCGC CGCGCTCCGC
TTCCGCTTCT CGCCTCCCCT GCTCGAGGGC GAGGCCGTCG AGACCGAGAT CCGCTTCACC
TACACCTTCG TCCTGGAGTG A
|
|---|
| Protein sequence | MTSPPSDGSP RARTLAAMAV ASLAIHAGGF AWAARLEARP AARPAPVVVE FEAAPPPPAP
VVPRPPAAPP APRRVAISRL PPPPADPPPP PPPNEPPPPA APAARAVPRV GVSLSSTTTG
GAFAVGVGNT LHGRASEIAA DPEAVRPYSA PRTSPARLSA QPRLLERPEI PYPADARRDG
LEGQVVLLLR IDAEGRVAAA RLLSAPGPAL GEAARAAALR FRFSPPLLEG EAVETEIRFT
YTFVLE
|
|---|
| |