Gene Amuc_2175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_2175 
Symbol 
ID6275780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp2652541 
End bp2653302 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content63% 
IMG OID642614235 
ProductChloramphenicol phosphotransferase family protein 
Protein accessionYP_001878763 
Protein GI187736651 
COG category[V] Defense mechanisms 
COG ID[COG3896] Chloramphenicol 3-O-phosphotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.662243 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCCC TGACGGAGCT TTTTATTCAT GATGCCCATG AACCTTCCAT GACCGCCGCG 
TCCGACATCC TCTGGAAACC AGCCTGCCTC TCCCGCCAGG AAGCCCCCAG CCTTACGGAA
GGGGACGGAA CCTGCCGGCC GGGAAACGGT GACCGGAACA CCTCCGCGAG CCGTCCGGAA
AACCATGAAA CCATGGGAGA GAAAGACCAC GCGGAAAACC GAAAAGCGCC CCGGCCGCGA
AGCGGGCGCG TCATCCTGCT CAACGGAGCC TCCAGCGCGG GAAAAAGCAC GCTGGCCCGG
AACTTGCAGC TTCTGCTGAA AGAGGCAGCC ATGATTTTCT CCATGGACGA TTATCTGGCC
ATGAGCCGGG GAAAGCATGA AACCGCCCTG GATGCCGTCA GGGAATCCGG CCTGCCCTTC
ATTGAATCTT TCCACGCCGC CATTGCCGAG GCGGCCCGGA AAGGCGCCCT GGTCATCGTG
GACCACGTCA TCGGAGAATC CCGCCGCTGG ATTCAGGACC TCCTGAACCG CCTGGACGGC
ATCCCCCGCA TCCTGGTCAG GGTGGAATGC CGCCAGGATG TTCTGCTGGA GCGCGAGCGG
CGCCGCACTG ACCGGACTCC TGCCCCGGCC CATGCCCAGC GCCAGCACGC AGGCATCCAC
CGCCATTTCC CGCATGATTT CTCCATAGAC ACTTCCGCAG ACACTCCCCG GAAATGCGCC
ATGCGGCTCA TCAGCCTCCT GCCGGGAGAA TTCCTGCCCT GA
 
Protein sequence
MIALTELFIH DAHEPSMTAA SDILWKPACL SRQEAPSLTE GDGTCRPGNG DRNTSASRPE 
NHETMGEKDH AENRKAPRPR SGRVILLNGA SSAGKSTLAR NLQLLLKEAA MIFSMDDYLA
MSRGKHETAL DAVRESGLPF IESFHAAIAE AARKGALVIV DHVIGESRRW IQDLLNRLDG
IPRILVRVEC RQDVLLERER RRTDRTPAPA HAQRQHAGIH RHFPHDFSID TSADTPRKCA
MRLISLLPGE FLP