| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_2087 |
|---|
| Symbol | |
|---|
| ID | 6275818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 2538156 |
|---|
| End bp | 2538986 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642614149 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001878677 |
|---|
| Protein GI | 187736565 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATCTG AAAAAACATA TTTCTACCCT GTCCTCTCGG ATTATGACTT CGGCTGGTTC
CGTTTATCAG GACCGGGGCT TGCCAACTGC ATGTTTGTGG CGGCTCGCGC CTACATACTC
AGCAGACGGG AAAACGCAGG CTACATTTCC CCCACCTGGA CCAAACTCAG CCCGGGGACA
TTCCTTCGCC GGGAGAAAGA TAAAAGAGTT TATTTCAAAA TTTTCAATGA GCTGGGAATC
AAAGGATTAA AAAAAGTCCA ACTGCTGCTT GCGGAAAAAT TGCGCCCCGG TTCCGGGAAG
GTGAAGCAAA TCCGCGGCAT GGGGGAATAC TTTGACGACC TCAATGAACA CATGGATCTG
GTGCATGAAT TCATAGAAAA AATCACCAGG AAGGAAATCA TTGAAAACGT GCGTCCGGAA
GCCCTGAAGG ACTGCATCGC CATTCACGTG CGGCTGGGAG ACTATTCTCC GGAGATGCGG
GTGGATATCC TCTGGTACGT GAATCTCGTC AGGGAAATCC TGTCCATCAA GCCGTCCCAG
CAATTCCTCA TCTTTTCCGA CGGCTCGGAC GAAGAGCTTC GGGAACTGCT GGCCCTCCCC
AACGTCAGGC GCGCGTTTTA CGGCAACGCC TACGCGGATA TGTACGCCAT CAGCAGGTGC
AAATGGGTCA TTGCTTCGGA TTCCACATTC TCCGCCTGGG GAGCGTTCAT AGGGGAACGC
CCCATCCTGT TCAACAAAAG GCATTTCAAG CGGGTATACC GGAACAGCGT TCCGGAAGCC
GTTCTGGGGG ACAGCACCCG CATTCCGGAT GAATTCAAGG CGCTGCTTTA A
|
|---|
| Protein sequence | MESEKTYFYP VLSDYDFGWF RLSGPGLANC MFVAARAYIL SRRENAGYIS PTWTKLSPGT
FLRREKDKRV YFKIFNELGI KGLKKVQLLL AEKLRPGSGK VKQIRGMGEY FDDLNEHMDL
VHEFIEKITR KEIIENVRPE ALKDCIAIHV RLGDYSPEMR VDILWYVNLV REILSIKPSQ
QFLIFSDGSD EELRELLALP NVRRAFYGNA YADMYAISRC KWVIASDSTF SAWGAFIGER
PILFNKRHFK RVYRNSVPEA VLGDSTRIPD EFKALL
|
|---|
| |