Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1998 |
Symbol | |
ID | 6275724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 2425874 |
End bp | 2428393 |
Gene Length | 2520 bp |
Protein Length | 839 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642614058 |
Product | phenylalanyl-tRNA synthetase, beta subunit |
Protein accession | YP_001878590 |
Protein GI | 187736478 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 0.448786 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATTT CCCTTAACTG GCTTTCCCAG TACATTGACC TGTCCGGCCT GAGCGTGGAT GAAATGTCTG ACATGCTGAC TTTTGCCGGC ATTGAGGTGG AAGACATCCG CCAGCAGGGC GTGGATTCCC CATACGTGGT GGTGGCCCGC GTGGCTTCCG CGGAACAGCA TCCCCAGGCG GACCGGCTGA AAGTCTGCCA GGTGGACGTG GGCGACGGCA CGCTGCACCA GATTGTGTGC GGCGCTCAGA ACTACAAGGT GGGGGACAAG GTCCCCTGCG CCCTGCCGGG AGCGGTGCTG CCCGGCAACG TTGAAATCAA GGTGGGCAAG CTGCGCGGCG TGGAGTCCCG CGGCATGCTC TGTTCCGCCT CCGAGCTGGG GCTTCCCGAC AAGGAGCACG GTCTCTGGAT TCTCCCTCAG GAACTGGAAC CCGGTACGCC GATTTCCCAG GTTGTCAAGG CGGATACCCT GGTGGAAGTG GAAGTAACGC CCAACCGGCC GGATTTGCTT TCCCACAACG GCATGGCGTA TGAACTGGCC GCTATCTCCG GCCGGGGGTA CAGGCCTGTT TCCATTGACG ACGCCGGAGT GGCGCTGGAA CCTGCCGGAG ACTTCGTGCG GCTGGACCAG CCGGAGCTGA ACCCGTACTA CACCGCCGTA AAAATCAGCG GCGTGAAAGT GCAGGAAAGC CCGGAATGGC TGAAGGAACG CCTGGTAGCC GTCGGCCTGC GCCCCATCAA CAACATCGTG GATATTACCA ACTTCGTCCT GCATGAACTG GGAACGCCCC TCCATGCCTT TGACGCGGCG AAAGTGCAGG GCGGCATCGT CACCCGCACC GCTTATGAAG GGGAAACCAT CAAGGCCCTG GACGGGCAGG AATACACGCT TAACTGCACG GATCTGGTTG TTGCGGACCA GTCCGGCAAG GCGCTCGCCA TCGGCGGCGT GATGGGTGGG GAGGAAAGCG GCGTGACGGA CGCCACTACG GATATCATTC TGGAGTCCGC CTGGTTCAAG CCCTCCTCCG TCCGCGCCAC GTCCCGCAGG CTGGCCCTGT CCTCCGACTC TTCCTACCGC TTTGAACGCG GCACTTCCGC CTGGAATGTC CTGCGCGGTT CCGTGCGCGC CGTGGAACTG ATTCTTCAGC TGGCGGGCGG AACGGCCTCC CCAACGTATG TGGCCGGTTC TCCCGTTCCT AATCCGGCTC ATGCTTCCAT GCCTTCCTGC GGAGGGGCGG ACGGCCCCGT TTCCGTGTTC GCTTCCCTGA AGCAGGGGAA GGGCGCCACG GTGACTAATG AACTGGGCTT TGTACAACTT CCCTGGAAAG CGCTGGATCA GATTTCCGGC GGTTCCATTT CTCATGAGGA AGGGACTCGC ATCCTGACGG CGCTGGGCCT GAAGCAGGTT CCGGATTCAC CGGAATGCTG GCTGATCCCC CCCCACCGCC TGGATCTCAC GCGCCCGTGC GACCTTCTGG AGGAAATCGT GCGCGTTTTC GGCCTGGACG GCATACCGTC CCGCTTCTCC GGCCCCTTCG TGGCGGAATC CCCGGTAGAT GTGGCCTATA ACTTCCAGAT GGAGCTGCGC CGCAAGCTGG CGGCCCTGGG ATTTTATGAA ACCCAGACCA TCAAGCTCAT CGCCTCCGAA TCCGCGGACG GCACCATCGC CCAGGTGAAG GACGCTTTGC CTCTGCGCCC CCTTCAGGAC GGTGACCTCA TCCGCGTATC CCTGCCGCTC AGCGAGGATC ACTCCGTGCT GCGCCCCGCC CATACGCCCG GCCTGATTGC CGCCGCCGTG CGCAACAGCA ACCAGGGCGT TTCCGGCCTG CGCTTCTTTG AACTTGGACG CGTCTTCCGC AATACGGGCG GCGGCAAGGG CAGGGACATT GAAACGGATA CCCTGGGTAT CCTGGTTTCC GGGGACCGCA CGGCGCGTTC CTGGGCGGAT CCCAGGCCGG AGCAGGCCTC CTTTGAGGAT CTGCTGGCCG TGATGGCGGC TCTGGCGCCG GGCCACCGTT TTACGCTCAC GCCTGCCAGA CCGCGCGAAC AGGCCGCCCT GGGGGCGGAC GTACAGCTGG ACGGGAAAGC CTGCGGCTAT TTCGCCCGCC TGTCCCTGGC GCGTTGCCGG GAGCTGGGCC TGGGTCAGCC CGTGTACGTG GCGGAACTGG ATCTCCGCAA AATGCAGGAA ATCCTGACCG CGCCCGTGAA GGCTGCGGAA TTGCCCCAGT TTCCCGGTTC TTCCCGCGAT GCGGCCATGG AACTGCCCCT CTCCACGCCC AATGCGGACA TTGTCAAGGC CGTGGAATCC GCACGGGAAA AACTGCTTGT CAGTTATTTC TGCTTTGACG TGTTCACGGA CCCCTCCGGC GAAAAGCTGC CGGCGGACCG CAAATCCATT GCCTATACCT TCCTGTACAG GGATCCGGCC AAGACCCTCA CGGCCGCGGA AGTGGATGCA GCGCACCAGC GCGTGCTGAA AGCCCTGACG GACAAAGTGA AGGGCCTTTC CTTCAGGTAA
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Protein sequence | MKISLNWLSQ YIDLSGLSVD EMSDMLTFAG IEVEDIRQQG VDSPYVVVAR VASAEQHPQA DRLKVCQVDV GDGTLHQIVC GAQNYKVGDK VPCALPGAVL PGNVEIKVGK LRGVESRGML CSASELGLPD KEHGLWILPQ ELEPGTPISQ VVKADTLVEV EVTPNRPDLL SHNGMAYELA AISGRGYRPV SIDDAGVALE PAGDFVRLDQ PELNPYYTAV KISGVKVQES PEWLKERLVA VGLRPINNIV DITNFVLHEL GTPLHAFDAA KVQGGIVTRT AYEGETIKAL DGQEYTLNCT DLVVADQSGK ALAIGGVMGG EESGVTDATT DIILESAWFK PSSVRATSRR LALSSDSSYR FERGTSAWNV LRGSVRAVEL ILQLAGGTAS PTYVAGSPVP NPAHASMPSC GGADGPVSVF ASLKQGKGAT VTNELGFVQL PWKALDQISG GSISHEEGTR ILTALGLKQV PDSPECWLIP PHRLDLTRPC DLLEEIVRVF GLDGIPSRFS GPFVAESPVD VAYNFQMELR RKLAALGFYE TQTIKLIASE SADGTIAQVK DALPLRPLQD GDLIRVSLPL SEDHSVLRPA HTPGLIAAAV RNSNQGVSGL RFFELGRVFR NTGGGKGRDI ETDTLGILVS GDRTARSWAD PRPEQASFED LLAVMAALAP GHRFTLTPAR PREQAALGAD VQLDGKACGY FARLSLARCR ELGLGQPVYV AELDLRKMQE ILTAPVKAAE LPQFPGSSRD AAMELPLSTP NADIVKAVES AREKLLVSYF CFDVFTDPSG EKLPADRKSI AYTFLYRDPA KTLTAAEVDA AHQRVLKALT DKVKGLSFR
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