Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1992 |
Symbol | |
ID | 6274246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 2419360 |
End bp | 2420286 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642614052 |
Product | hypothetical protein |
Protein accession | YP_001878584 |
Protein GI | 187736472 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.141259 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 0.0904495 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCCGCA TGGCATGGAT TACCTCCGGT TATATACCTT CGCCCGGGCG CATGGCCGTA ATCGCCGGTA CCACCTTTAC GCAGCTGGTG CGCATGAAGG TGTTTCTCTT TCTTGGGCTC TTCGCCGTGG CGTTGCTGGC TCTGAGTTCC TTCCGCCTGA GCGCGGTGCT GGGACCTGAA ACCGGGGGAA TCAATGAACT CGTGCTGCTG AAAAACTCCG CCTACGGCGC CATGCGGGTG TTCGGCCTCT TTTTCTGCGT GGCGGCCACG GCCCTGATTA TTCCCAGGGA TGCGGAGGAC CGTATTCTAT ACACTATCCT TTGCAAACCG GTGCCGCGCA TCGACTATCT GATGGGGAAG GTTCTGGGGG TGCTGGCCCT GACCCTGGTT GCCGTTCTGC TGATGGATGC CGTAATGACG CTGGTGCTGT GGATGCGGAC GGATACGGTG GTGGCGGAGC AGATAGCCTC GCTGAAAGGC CGTTATACGT TGGAGGAAAT GCAGCCGTAC CTGGACAGGA TCCGCCTCCA GGGAGCTACC TGGAACGTGC AGACGGGGCT GGGCGTGATG ATGTGCGAGT TTGTCGTGCT TTCCTCCCTC ACGCTGTTGA TGTCCTGCGT GACGAACGGC ACCATTATCA GCGCGCTGCT GACGTTCATG ATCTATCTGG CGGGACTGTT CCAGACGCAG GCTCTTTCCC TGTGGGTGGG ATCCGGCACG GATGGCCTTT CCTGGTGGGA GGTGGCGGGC AGCAGGCTCT TTTCCCTGGT TTTTCCGAAT TTCCAGATTT ATTCCGTGAC GGATTCCGCC CTGAACGGAC GGCTTATTCC CCTTTCCCTG TTCGGAACCC TGGCCCTGAT TACGCTGGGA TACTTCGTCT TTCACATGAC GCTGGCGGCG TGGCTGTTCA GGAAAAAGGA ATTCTAA
|
Protein sequence | MIRMAWITSG YIPSPGRMAV IAGTTFTQLV RMKVFLFLGL FAVALLALSS FRLSAVLGPE TGGINELVLL KNSAYGAMRV FGLFFCVAAT ALIIPRDAED RILYTILCKP VPRIDYLMGK VLGVLALTLV AVLLMDAVMT LVLWMRTDTV VAEQIASLKG RYTLEEMQPY LDRIRLQGAT WNVQTGLGVM MCEFVVLSSL TLLMSCVTNG TIISALLTFM IYLAGLFQTQ ALSLWVGSGT DGLSWWEVAG SRLFSLVFPN FQIYSVTDSA LNGRLIPLSL FGTLALITLG YFVFHMTLAA WLFRKKEF
|
| |