Gene Amuc_1992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1992 
Symbol 
ID6274246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp2419360 
End bp2420286 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content58% 
IMG OID642614052 
Producthypothetical protein 
Protein accessionYP_001878584 
Protein GI187736472 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.141259 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.0904495 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGCA TGGCATGGAT TACCTCCGGT TATATACCTT CGCCCGGGCG CATGGCCGTA 
ATCGCCGGTA CCACCTTTAC GCAGCTGGTG CGCATGAAGG TGTTTCTCTT TCTTGGGCTC
TTCGCCGTGG CGTTGCTGGC TCTGAGTTCC TTCCGCCTGA GCGCGGTGCT GGGACCTGAA
ACCGGGGGAA TCAATGAACT CGTGCTGCTG AAAAACTCCG CCTACGGCGC CATGCGGGTG
TTCGGCCTCT TTTTCTGCGT GGCGGCCACG GCCCTGATTA TTCCCAGGGA TGCGGAGGAC
CGTATTCTAT ACACTATCCT TTGCAAACCG GTGCCGCGCA TCGACTATCT GATGGGGAAG
GTTCTGGGGG TGCTGGCCCT GACCCTGGTT GCCGTTCTGC TGATGGATGC CGTAATGACG
CTGGTGCTGT GGATGCGGAC GGATACGGTG GTGGCGGAGC AGATAGCCTC GCTGAAAGGC
CGTTATACGT TGGAGGAAAT GCAGCCGTAC CTGGACAGGA TCCGCCTCCA GGGAGCTACC
TGGAACGTGC AGACGGGGCT GGGCGTGATG ATGTGCGAGT TTGTCGTGCT TTCCTCCCTC
ACGCTGTTGA TGTCCTGCGT GACGAACGGC ACCATTATCA GCGCGCTGCT GACGTTCATG
ATCTATCTGG CGGGACTGTT CCAGACGCAG GCTCTTTCCC TGTGGGTGGG ATCCGGCACG
GATGGCCTTT CCTGGTGGGA GGTGGCGGGC AGCAGGCTCT TTTCCCTGGT TTTTCCGAAT
TTCCAGATTT ATTCCGTGAC GGATTCCGCC CTGAACGGAC GGCTTATTCC CCTTTCCCTG
TTCGGAACCC TGGCCCTGAT TACGCTGGGA TACTTCGTCT TTCACATGAC GCTGGCGGCG
TGGCTGTTCA GGAAAAAGGA ATTCTAA
 
Protein sequence
MIRMAWITSG YIPSPGRMAV IAGTTFTQLV RMKVFLFLGL FAVALLALSS FRLSAVLGPE 
TGGINELVLL KNSAYGAMRV FGLFFCVAAT ALIIPRDAED RILYTILCKP VPRIDYLMGK
VLGVLALTLV AVLLMDAVMT LVLWMRTDTV VAEQIASLKG RYTLEEMQPY LDRIRLQGAT
WNVQTGLGVM MCEFVVLSSL TLLMSCVTNG TIISALLTFM IYLAGLFQTQ ALSLWVGSGT
DGLSWWEVAG SRLFSLVFPN FQIYSVTDSA LNGRLIPLSL FGTLALITLG YFVFHMTLAA
WLFRKKEF