| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1987 |
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| Symbol | |
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| ID | 6274111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 2413869 |
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| End bp | 2414870 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642614047 |
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| Product | squalene-hopene cyclase-like protein |
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| Protein accession | YP_001878579 |
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| Protein GI | 187736467 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.374107 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.15857 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATC CCCGCCTCCT GCTTACCGCT TTCTTGACCT GCTGCATGAC GGCCGCACCG
CAAAACGCAG CGGCCCAATC CCCCATGAGA ACGTCTTCTT CCGTGCCTCC CCAGGTGGAA
CTGATGTATG TGAAGGGACT ACGCTATCTT CAGAATGCCC AGAAAACGGA TGGAACCTAT
GATGGAACTT ACGGGAGGGA GCCCGGCATC ATCGGCTTTT GCCTTATGTC CGTGCTGGCT
CACGGAGACG ATCCGAACGC GGGGCCGTAC GCCACCATGG TGCGCCGCTG CGTAGATTAC
ATCCTGTCCA AGCAGAACAA GGTATCCGGC TACATTGGGG ATTCCATGTA CAACCACGGC
TTCGCCACTC TCGCCCTGGC GGAAGCCTAC GGCATGGTGC GGGACGACCG CATAGGCCCC
GCCCTCCGCA AGGCCGTAGC TCTGACACTG ACCGCCCAGA AAAAAAACAA AACGGGAGGC
TGGCGCTATT CCCCGGAATC CACGGACGCA GACAGCACGG TGACCGGCTG CCAGCTTGTC
TCCCTGTTCG CGGCGCGCAA CGCGGGCATT CCCGTGCCGG ACGAGGCTTT TGAACGCGGC
CTCAAGTACA TGGCTTCCTG CCGCGACAAG AAAGGCGCCT ACGGCTACAC CGGGCCGGCG
GGTCCCCGCG TCACCCTCAC GGCCATCGGT TCCCTGACGC TGTCCCTGGC GCGCCTTAAA
ACGGACCCGT CCTTCAAGGA TTCCCTGGCC TACCTGAAAA AGCACCTGAA TTACCGGGAT
TCCACTTATC CGTTTTATTT TGAATATTAC ATGTCACAGG CCCTGTTCCA TGCGGACCAG
GAAGTGTGGA AGGAATGGAA TTACAAAAAT ATGCGCTATC TGGGAGCCTC CCAGGCGCCC
AACGGGTCCT GGCTTTCCGA TCATTCCGCG GCATATTCCA CTTCCGCCGC CCTGCTTTCC
CTTGCGCTTA ATTACAGATT TCTACCCATC TATGAACAAT AG
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| Protein sequence | MKNPRLLLTA FLTCCMTAAP QNAAAQSPMR TSSSVPPQVE LMYVKGLRYL QNAQKTDGTY
DGTYGREPGI IGFCLMSVLA HGDDPNAGPY ATMVRRCVDY ILSKQNKVSG YIGDSMYNHG
FATLALAEAY GMVRDDRIGP ALRKAVALTL TAQKKNKTGG WRYSPESTDA DSTVTGCQLV
SLFAARNAGI PVPDEAFERG LKYMASCRDK KGAYGYTGPA GPRVTLTAIG SLTLSLARLK
TDPSFKDSLA YLKKHLNYRD STYPFYFEYY MSQALFHADQ EVWKEWNYKN MRYLGASQAP
NGSWLSDHSA AYSTSAALLS LALNYRFLPI YEQ
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