| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1972 |
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| Symbol | |
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| ID | 6274897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 2394351 |
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| End bp | 2395376 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642614034 |
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| Product | HhH-GPD family protein |
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| Protein accession | YP_001878566 |
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| Protein GI | 187736454 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1194] A/G-specific DNA glycosylase |
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| TIGRFAM ID | [TIGR01084] A/G-specific adenine glycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.224545 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.000205487 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTGACG GCACCCCCCA TTTTAACATC CATGCTTTCC GGAACGCGCT GGTAGAATGG
TTCAGGCGCG AAGGGAGGGA TTACCCGTGG CGGCGGACAA CGGATCCGTG GCACATCCTT
GTTTCCGAGC TGATGCTGCA GCAGACTACC ATTCCCACCG TTTTGGGAAG ATATGACAGA
TGGATGCGCC AGTTCCCCAC TCCGGCGCAT CTGGCTGCCG TGGACGAACA GACGGCCCTG
CGCTCCTGGG AAGGGTTGGG CTATTACCGC CGCGTGCGTT CCCTCCAGGC CATCGCCAGG
GAAATCGTCA ACGAATTCGG AGGGCGGTTC CCGGACAATG CGGAAGGGCT GAAACGCCTG
CCGGGCATCG GCCCCTACAC GTCGGGAGCG CTCCTCTCCT TCGCCTTCAA CAAGGCGGCT
CCCATTGTAG ACGCCAATGT CGCGCGCGTC CTGGCCCGCA TTGACAATTA TTCCGTTCCC
GTGGATTCCA CGGAAGGCCA GAAATACCTG TGGAGCCGCG CGGAAAGCCT GGTGGATCCG
GAACATGCCC GTGAATTCAA TTCAGCCATC ATGGAACTTG GGCAAACCTG CTGCAGCATC
AGTTCTCCAG ACTGCCTGCT GTGCCCCGTG CGCCCCTTCT GCTCTGCGGA ACGGCCGGAA
ACGCTTCCCG TCAAAAATCC CAAGCCTCAA GTCACCCGGG TGGAACACCA CGATATTCTT
TACATCCGCG GCAAATCCGT CCTGCTGGCC AAATGCCCGG AAGGCAAGCG CCATGCCGGC
ATGTACCGCT TCCCCCAGAG GGAGGACGAG CACACCCTTT CCCTGCCCCA TGTCCTGAAA
CAAACCTACA GCATTACCCG CTACAGGGTG ACCCGCTACA TCCACCATGT GACGGATACG
CCTCTCCTCA GGGAAGGAGA GGAATTCGTG CCGTTGGACA AAATCCACGG GCTGCCCATG
GCCTCACCGG ACCGCAAGGC ACTGAACTCC CCCACCCTCG GCAAACTGCT GGACCATATC
AGATGA
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| Protein sequence | MTDGTPHFNI HAFRNALVEW FRREGRDYPW RRTTDPWHIL VSELMLQQTT IPTVLGRYDR
WMRQFPTPAH LAAVDEQTAL RSWEGLGYYR RVRSLQAIAR EIVNEFGGRF PDNAEGLKRL
PGIGPYTSGA LLSFAFNKAA PIVDANVARV LARIDNYSVP VDSTEGQKYL WSRAESLVDP
EHAREFNSAI MELGQTCCSI SSPDCLLCPV RPFCSAERPE TLPVKNPKPQ VTRVEHHDIL
YIRGKSVLLA KCPEGKRHAG MYRFPQREDE HTLSLPHVLK QTYSITRYRV TRYIHHVTDT
PLLREGEEFV PLDKIHGLPM ASPDRKALNS PTLGKLLDHI R
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