| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1948 |
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| Symbol | |
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| ID | 6275126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 2366548 |
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| End bp | 2367162 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642614008 |
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| Product | hypothetical protein |
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| Protein accession | YP_001878542 |
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| Protein GI | 187736430 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.0566548 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTGCCGTT TGATTTTTGA AACCGTTAAA TGGGAGAATG GCGCTCCCTG TCTGCTTCCC
TGGCACCAGC GGAGGATGGA GGCCGCCATC GGCGTTCATG GTTCGGACGG AGCTTCCGTC
CCCGATCTGG CTTCCGTTCT TTCGGACTGT CCCGGCCCGG AGGGCCGTGG TGTTTACAAA
TGCCATATCA CGTATGATAC GCGGGGAAGG GTGCGCCGCA CCTCCTTTGA GCCCTACCGT
CCCCGGCAGG TGAAGACGCT GACGTGTGTG GAAATGCCCG GGCTGGATTA CTCATGCAAG
TGGGAGGATC GGACAGGGCT TCTGGCGGCA GGGGCGGCGT TGGGCTGTGA CGAAGAAGCG
CTGATTCTCC GGAACGGGAT GGTGACGGAT ACGCGGTACA GCAACGTGGT GTTCGGGGAC
GGGTCTTTCT GGGTTACTCC GGAAACTTTC CTGCTCCCGG GAACCAAGCG CGCCTTCCTG
CTGTCCCGCG GAGACATTCA GGAATGTTCC GTAAGAGCGG AAGATATAGG CAAATTCCGC
TTCTGTTCCC TGATTAATTC CATGCTGGAT CCCGGCGATG TGGTGGTGCG GACGGAGGAT
ATTATCCTGT GTTGA
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| Protein sequence | MCRLIFETVK WENGAPCLLP WHQRRMEAAI GVHGSDGASV PDLASVLSDC PGPEGRGVYK
CHITYDTRGR VRRTSFEPYR PRQVKTLTCV EMPGLDYSCK WEDRTGLLAA GAALGCDEEA
LILRNGMVTD TRYSNVVFGD GSFWVTPETF LLPGTKRAFL LSRGDIQECS VRAEDIGKFR
FCSLINSMLD PGDVVVRTED IILC
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