Gene Amuc_1927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1927 
Symbol 
ID6275286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp2339811 
End bp2340608 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content54% 
IMG OID642613987 
Producthypothetical protein 
Protein accessionYP_001878521 
Protein GI187736409 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.595624 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.0101264 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCCGT TTCCCGGCTG GAGCGGCAGA GGCGTGCGGC CCTTTTTCAT TCAGTATCTG 
CTGATGAAGA AAATTTTGCA GTGGATGGCA TCTCCCCGTC TCGCGTGCGT GCTGATGGCT
TACGCCGTGC TGCTCATTTT TCTCGGCACT CTTGAGGCGC GGTCTGTCGG TGTTTCCGCT
GTACAGGCCA GGTATTTTGA AAGCTGGGGC TGCCTTTCCT TCGGGATGAT TTCTCTGATC
GGCGGCGCCG GCGTAGGGGC ATTAGCCGTA CTGAATATTT CGGCGTCTGT TTTCCGGCGT
GCGCGCTTCA CACTGCGCGG CGTGGGCTTG ATCCTCACGC ATGCCTTTCT GGTAGTACTG
ATTTTGGCGG GGGCGTTGCA GTATTTTCTG CGTACGGAGG GAATACTCGT TCTGGATGCA
GGTGAGGTCT CACACGAAAT ACTGGCAGGC GAAGGGAATG GAAGAAAAAA TATCCCCCTT
GGTTTTTCAG TAAAGCTGAA AAAATTTGAT GCCCGGACAT GGACGGGAAG CGATATCCCC
AGCAGCTTTT CAAGCGAGGT TTGCTTTATG CGCGGCGGGG AAAGCACGGA AACGGTTATT
CGCATGAATG CTCCGGTCTC CTTTGGCGGC TGGATTTTTT ACCAGAGCAG TTACGCCAAT
GGGGGCCGCA CGAGTGTAAT CACAGCCGTA CACAATCCGG TGCGCTTTTT TCCGTGGATA
TCGGTGCCCG GCGTATTTGC GGGCATGCTG CTGATTTTTC TCCCAACCCT GCGTGCCCGA
AAAAAACATG CAGTGTAA
 
Protein sequence
MLPFPGWSGR GVRPFFIQYL LMKKILQWMA SPRLACVLMA YAVLLIFLGT LEARSVGVSA 
VQARYFESWG CLSFGMISLI GGAGVGALAV LNISASVFRR ARFTLRGVGL ILTHAFLVVL
ILAGALQYFL RTEGILVLDA GEVSHEILAG EGNGRKNIPL GFSVKLKKFD ARTWTGSDIP
SSFSSEVCFM RGGESTETVI RMNAPVSFGG WIFYQSSYAN GGRTSVITAV HNPVRFFPWI
SVPGVFAGML LIFLPTLRAR KKHAV