| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1894 |
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| Symbol | |
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| ID | 6273816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 2299826 |
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| End bp | 2301133 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642613955 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_001878489 |
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| Protein GI | 187736377 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.550183 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTTC ATTCCCATTC CATTTCCTCC CTGCAAGGGG CACTGACCGT GCCCGGAGAC
AAAAGCATTT CCCACCGCGC CGCCATTCTG GGAGGCCTGG CGGAAGGAGT GACGGAAGTG
GATAATTTTC TATGCAGTGA AGATTGCCTG AATACCCTGC GCGCCATGGA GCAGCTAGGC
GCCAAAGTGG ATGTGCTGGA AGAACGGCAG GGATACGGCC CCGTCCGCTT CCGAATTACG
GGCGTCGCCA TGAGCCCCAA GGCTCCTGAA CGGCCCATTG ACTGCGGCAA TTCCGGCACG
GGCATGAGGC TGCTGGCCGG GATGCTGGCC GCCTGCCCCT TTGATTCGGA AATGTTTGGG
GACGCTTCCC TGAGCTCCCG CCCCATGGGC CGCATCATGC AGCCTCTGGA ACAGATGGGA
GCGCGGATTG AAGCCCGGGG AGCCAAACCG GGCTGTGCTC CGCTGAGCAT TCACGGCGGG
CGGGTGCACC CCATTTCCTA CACGCTTCCC ATGGCCAGCG CCCAGGTTAA AAGCGCCATT
CTATTGGCGG GCATGTTTGC GGACGGAACC ACCACCGTGC GCCAGCCGGC CGTCACCCGC
GACCATACAG AACGCCTGTT CCGCCATTTC GGCGTTCCCT GCACCGTGGA TGGACTTACC
GTCGGAACCT GCGGGCCAGC TCTCCCCGTC GCCCATGATT TGACAGTCCC GGCAGATATT
TCCTCCGCAG CCTTCTGGAT GGTGGCCGCC GCCAGCCGTC CGGGTTCCCG CCTGACGTTG
CGCCAGGTAG GGCTGAACAA GACGCGGAAC GCCGTCATCA GCGCTCTGCA GCGGATGGGC
GCGCGAATGG ACATCGTGCC CACTTCTCCG GAAGATGCCG GCGAACCATA CGGCGATATT
ACCGTGTACG GTTCGGATTC CCTGCACGGC ACCAGCCTCC TCCCGGAAGA AATACCCAAC
CTCATTGACG AGATACCTAT CCTGGCCGTA GCGGGAGCCC TGGGCCGGGG AGACTTCATC
GTCCGAAACG CCCGCGAATT ACGCGTCAAG GAAACGGACC GCATCGCCAC CACGGCGGCC
AACCTCCGGC TCATGGGCGT GGATGTGGAA GAATTTGACG ATGGCATGGT TGTTCACGGC
GGCACTCCCC TGAAGGGAAC GGAATTATCC AGTTATGGGG ACCACCGCAT CGCCATGAGC
TTCCTGGTGG CCGGACTCAG CGCACAGGGA GAAACCGTAG TGACGGATGC GGAATGCATC
AATACGTCCT ATCCCGGTTT TGAACGGGAT CTGGCTCAGT TCCTGTAA
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| Protein sequence | MNLHSHSISS LQGALTVPGD KSISHRAAIL GGLAEGVTEV DNFLCSEDCL NTLRAMEQLG
AKVDVLEERQ GYGPVRFRIT GVAMSPKAPE RPIDCGNSGT GMRLLAGMLA ACPFDSEMFG
DASLSSRPMG RIMQPLEQMG ARIEARGAKP GCAPLSIHGG RVHPISYTLP MASAQVKSAI
LLAGMFADGT TTVRQPAVTR DHTERLFRHF GVPCTVDGLT VGTCGPALPV AHDLTVPADI
SSAAFWMVAA ASRPGSRLTL RQVGLNKTRN AVISALQRMG ARMDIVPTSP EDAGEPYGDI
TVYGSDSLHG TSLLPEEIPN LIDEIPILAV AGALGRGDFI VRNARELRVK ETDRIATTAA
NLRLMGVDVE EFDDGMVVHG GTPLKGTELS SYGDHRIAMS FLVAGLSAQG ETVVTDAECI
NTSYPGFERD LAQFL
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