Gene Amuc_1875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1875 
Symbol 
ID6275472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp2279493 
End bp2280725 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content60% 
IMG OID642613936 
Producthypothetical protein 
Protein accessionYP_001878470 
Protein GI187736358 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.110835 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.701823 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGCA ATACATCTTC AACAGGCGGG GAACGCCAGG ACCGTCCGGG ATTCGGCTGG 
GCCGGGCGTT CCGCTGCCCT TTCCCTGTGG ATCATTTCCG TTCTATTATG GTGCGTGCTG
ATGCGCCAGT CCTTTACGGC CATGCCCTGG GACGACATGA CGGTAGCCGG AGAAAGGTTG
CAGGAATTGA GAAGGCCGTT CGCCGCTGCC GGAATGGCCG TAGGGGTCCT TGGCTCCAGC
CTCTGTCTGG GGTGCCTGTT CTGGCTCTGC CTGTCTTCAC TGACGGGTTC CGGCTGGGGC
ATTGCGCTGA GAAGGGTGCT GGCGGCGGGT TGCTGGGGGT TTTTACCCGG TGTTTTGGTA
TTGGCCGGAA CGGTCGGCTG CCTGACTACC GTGATTTTTC CGGAAGCAGC CCGCTACTGG
GGAGTGGCGG ATGTTGCCTC TCCCGGCGTC CAGCCCTTCG GCGTTCTGGA TTTGGCTGAC
TTCTCATGGT GGAACCCGGC ATGGCTGTAC GTGCGCGTGG GGAGTATTGC GGTGCTTTCT
TGGAGCATGG CCCAGGTATG GGAAACGCTG GTTGCGGAAA AAAATGTCTG GCAGCCTTCC
TTCCGCCGGG GCTCTGCCGC CTTCTGCATG GTTGTGACGG TGATGATGCT GGGCCTGCTG
GGGATGGACA TGCTGGGAGG GACGGGAAAG GTCGTTCTTT CCATGTTCCC CGTATACATG
ATTGCATATG TTCTGCTGGT GTCCCTGGCA TTCGCTGTGT TGTCTGCCGT GTTCCTGAGG
CGGCTGGACG GAGGGAAGGA GCTGCCTTGG CCCCGCCTGG GCGGCATGCT GACGGCTATG
GTTCTGGTGA AAGCCTATAT TGTGTATTCT CAGTACATGA TTACCTGGTA CGCCTCCATT
CCGGCTGAAA TGTCCTTTTA TAACGCAGCC GCTTCCTCCG GCTGGTCCGG AATGTTTGCC
GCGGCTCTTG TTCTTCAGCT TCTGCTGCCT TTCCTTATTT TGCTGTTCCC CGCGTTGAGA
CGCCGGCCGT CCGCGTTGGG CGCTGTATGC GCCGGGGTGC TGTTTGGCTC CCTGCTGGAA
GCATGCTGGA TGTTCGGCCC CGGACTTGGG CTGGACCCGT CCGCATGGAA GGCATGGCTT
CCGCTTGTCC TGCTCTTGGG AGGGATGGCC CTGATCTGCT GTTTTTCCTT CCTGGGGGCA
CTGAGCGTCC GCAGGGTATT TCCCGAATCA TGA
 
Protein sequence
MNSNTSSTGG ERQDRPGFGW AGRSAALSLW IISVLLWCVL MRQSFTAMPW DDMTVAGERL 
QELRRPFAAA GMAVGVLGSS LCLGCLFWLC LSSLTGSGWG IALRRVLAAG CWGFLPGVLV
LAGTVGCLTT VIFPEAARYW GVADVASPGV QPFGVLDLAD FSWWNPAWLY VRVGSIAVLS
WSMAQVWETL VAEKNVWQPS FRRGSAAFCM VVTVMMLGLL GMDMLGGTGK VVLSMFPVYM
IAYVLLVSLA FAVLSAVFLR RLDGGKELPW PRLGGMLTAM VLVKAYIVYS QYMITWYASI
PAEMSFYNAA ASSGWSGMFA AALVLQLLLP FLILLFPALR RRPSALGAVC AGVLFGSLLE
ACWMFGPGLG LDPSAWKAWL PLVLLLGGMA LICCFSFLGA LSVRRVFPES