| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1844 |
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| Symbol | |
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| ID | 6274599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 2240665 |
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| End bp | 2241624 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642613907 |
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| Product | PDZ/DHR/GLGF domain protein |
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| Protein accession | YP_001878442 |
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| Protein GI | 187736330 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.880462 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATGA AAACCTGTAT CTTTCTGACA TTGGGATTGC TGGTAGGTTC GGGCTCCGGA
TATTCCATTG ACCGGCCCGC AGGAAGTACG GACAACCTTC AGCCGCCTCC TCTGACGCCG
TACGCGCATC AGGTGAAGCC GCTCCCCTCT TCCAAACCGG CCAGACTGGG AATTGTTCCG
GGCACGGTGC CCCAAGCGCT CGTTGCGCAG CTGGAGCTTA GTGGATTCCC CGGAGTGCTG
GTGACCAAAG TGATGCCGGA CAGCCCCGCC GCCAAGGCCG GGCTCCAGGA AAATGACGTC
ATGGTCAAGC TGGGGGATGT CTCCCTGTCC GGTCCGCAGT CTGTGACGGA AGCCCTGTCT
GAAAAGGTGC CTGGAGACAG GATTACGGCT GTATTTTACC GGAAAGGAAA GAGGGAGACT
GTTGAAATTA CCCTGGATGG GGGAACGCTT TCCGCTGAAG AAATACTGGC GGCCCAGGGG
GATCCCCGCA CGCAGCCCCG CGCAGTTCCT TCCGTCCGGC GTCAGACGGC GCCTTTTTCC
GGAATGGCTG CACGGCCTAA TCTCCCCCAG CGTATTCTGG ATATGCAGCA GATGATGGAT
GAGTTTTTGA AGGATTCCGC CATGGATGAT TACCGGATGG ACGACATCAT CGGCCGGATG
AACCTGACTC CCGGCGCGGC GCAAATGCTC CGGAGCTTGC AGGGACTTCA TCAAATGCCC
ATGCCTCCCA TGGGCAAGGT TTCCGGAGGG GGCCAGAGCA TGTCTTCCGT CCGGATGTCG
GATGCCAACG GGACTATCGT GGTTTCTTCT AATTCCCGGA CGGGAACCAC AGTTCATGTG
ACGGACTCTG CGGGAAAGGT TCTGTATTCC GGCCCCTACA ATACGCAGGA GGAAAAAGCC
GCCGTGCCGG AAGCCGTCAG GGAACGCTTG AAAAACATAG AAACCAATTT CTGCTTTTAA
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| Protein sequence | MDMKTCIFLT LGLLVGSGSG YSIDRPAGST DNLQPPPLTP YAHQVKPLPS SKPARLGIVP
GTVPQALVAQ LELSGFPGVL VTKVMPDSPA AKAGLQENDV MVKLGDVSLS GPQSVTEALS
EKVPGDRITA VFYRKGKRET VEITLDGGTL SAEEILAAQG DPRTQPRAVP SVRRQTAPFS
GMAARPNLPQ RILDMQQMMD EFLKDSAMDD YRMDDIIGRM NLTPGAAQML RSLQGLHQMP
MPPMGKVSGG GQSMSSVRMS DANGTIVVSS NSRTGTTVHV TDSAGKVLYS GPYNTQEEKA
AVPEAVRERL KNIETNFCF
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