| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1815 |
|---|
| Symbol | |
|---|
| ID | 6275605 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 2202069 |
|---|
| End bp | 2204255 |
|---|
| Gene Length | 2187 bp |
|---|
| Protein Length | 728 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642613879 |
|---|
| Product | Beta-N-acetylhexosaminidase |
|---|
| Protein accession | YP_001878414 |
|---|
| Protein GI | 187736302 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3525] N-acetyl-beta-hexosaminidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0101329 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 0.0951479 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGCA TGAAGTTCCT TTTATTATCG TTTGCATGGG TGTGCATGGC TTGCGCCGGA
GCATGGGGGC AGGATACGGC CCCGTCTTTC CCGGCTAACG GGGCCAATTA CAGGCTGTTT
CCGGCGGACC GGCCTCCGCT GGTTCCCAAA CCCCAGCAGC TGCGCTGGGA CGACAGGGCC
ATTCCCGTGC AGTCCGTACG CATTTTGGCT CCGTCTCCGT CCAGGACTTC CTATCCGGAA
CAGATGAAGT TCATTGTTTC CGAATTGAAA TCTTTTCTGG CGGAGCACTG CGTGAAGGTG
GCTCCGGACG GGACGTTTGC CGTTAAATTC GTCAAGGGGG ATGTGAAAGC CGGCACGGAA
AATTCCAAGC TGAAGGAGGA GGCTTATTCC CTCCGAGTAA CTTCCGGCGG CGCACTCATT
ACGGCGATGG ATACCAGAGG ATTCTATTAC GGCATGAAAA CGCTGGAGCA GCTTCTTTTG
CGCCGCGGCG GGACGACGAC CATTGCCGCC TGCGATATCG TGGACTGGCC GGATTTTGAA
ATCCGCGGAT TCATGAACGA TGTGGGACGC AATTACATGC CGCTGCCTCT GATTGCACGG
GAGCTGGATT CCATGGCGCA GCTCAAGCTG AATGTTTACC ACTTCCATTT TACGGAGAAC
CCCGGCTGGC GGCTGGAATC CAAAATTTAT CCGGAGCTGA ACGCCCCCGA AAATTATACG
CGCATGCCTG GCAAGTTTTA CACGCAGAAG GAGTTTAAGC AGCTGGTGGA GTACTGCCGC
CTGCGCAATA TCCTGCTGAT TCCGGAGATG GATATGCCGG GGCACAGCCA GATGTTCCGC
AAGGCGCTCA ACGTGAAGAT GAGCGATGAA AAAGCCACCA AAGCCCTGGT GGCCCTGATC
AAGGAGTTGT GTTCCCTGGT TCCCAAGGAG AAAATGCCCA TCATCCACAT TGGCACGGAC
GAGGTGCGCG GCAAGGATGA GCAGGTGAAC AATGAGATTC TTAAGGAGTA CATCCATGCA
GTGGAGTTCT GCGGCCGCAT TCCCATGAGA TGGCAGCCCG GCCTGACGCC GAAGGGCTAT
AACGGCTCCA TCCAGCAGTT ATGGTCCGGC CGCCAGAACC GTGGCGCATG GCCTACCGAC
GGAGCGAAGT ATGTTGATTC CCTGGAGACT TACCTGAACC ACCTTGATCC GTTTGAAACG
GCCATGACCA TGTATTTCCG CCGGGCATGC CCGTTTCGGA ATGCGGAAGG ACTGGGCATG
ATGCTGTGTT CTTTCCCGGA CCTGGAAATT ACGGATCCGC GCAACCAAGT TCTTCAGACG
CCCGTTTACG CCGGCATGGC GTTCGTTTCC GAACCTTTGT GGAATAATCC CCATGAGAAG
GTGCTGGGAG ACCCCAACCA GGACGAATAT ATGAAGTATT TTTCCAATCT GCCCGTGCAG
GGGGATCCTC TGCTGAAGGG GTTTGCGGAT TACGAGAACC GCGTGCTCGC CATCCGGGAC
CGTTTTTTCG TGGATAAGGA GTTTAATTAC GTACGGCAGG CGAATATTCC CTGGAAATTG
CTGGGGCCTA TTCCCAACGG CGGTAAGACG GAAAAGGAAT TCGCTCCGGA GGAGGACAAC
AAGGCAGGGA AGATGAGGGA TTCCTACGAG ATTGACGGCG TCACCTATGA GTGGTCCGGA
GACGATTACA CGGGGGCCAC CATCATTTTC AAGCATTACT GCGATTTTCC GACGCTGTTC
AATGGCGCAA AGATGGGAGC TTATCCCCAC AAAAACCACA CTTATTACGC GCAGACCTGG
ATTTATTCCC CCAAGGCGCA GACGGTGCCT TTCTGGATCA GCGGACATAC CTGGGCCACG
TCCGATTGGC GCAACGGTCC GGCGAGCGTT CCCGGCAAGT GGTTTCATGC GGATCCCAAA
TTTTTTGTGA ACGGCCGGGA GATTGCCCCC CCGCAATGGA AAAAGCCGCG TAACAGCGGC
GTGATGGTGG ATGAAAACTA CCATTTCCGG GAGCCTTCCA TGGTTCCTCT TAAGAAGGGT
TGGAACCGCG TGCTGGTAAA GAGCCCCAGC AACAATTCCG CGCGTCGGTG GATGTTCACA
TTCGTTCCGG TGCTGGTGAA CCCCAAGACG CCCGGCTGCA ATGTGAAGGA GTATCCCGGC
CTCAAATTTT CCACACGTCC GGAATAG
|
|---|
| Protein sequence | MNRMKFLLLS FAWVCMACAG AWGQDTAPSF PANGANYRLF PADRPPLVPK PQQLRWDDRA
IPVQSVRILA PSPSRTSYPE QMKFIVSELK SFLAEHCVKV APDGTFAVKF VKGDVKAGTE
NSKLKEEAYS LRVTSGGALI TAMDTRGFYY GMKTLEQLLL RRGGTTTIAA CDIVDWPDFE
IRGFMNDVGR NYMPLPLIAR ELDSMAQLKL NVYHFHFTEN PGWRLESKIY PELNAPENYT
RMPGKFYTQK EFKQLVEYCR LRNILLIPEM DMPGHSQMFR KALNVKMSDE KATKALVALI
KELCSLVPKE KMPIIHIGTD EVRGKDEQVN NEILKEYIHA VEFCGRIPMR WQPGLTPKGY
NGSIQQLWSG RQNRGAWPTD GAKYVDSLET YLNHLDPFET AMTMYFRRAC PFRNAEGLGM
MLCSFPDLEI TDPRNQVLQT PVYAGMAFVS EPLWNNPHEK VLGDPNQDEY MKYFSNLPVQ
GDPLLKGFAD YENRVLAIRD RFFVDKEFNY VRQANIPWKL LGPIPNGGKT EKEFAPEEDN
KAGKMRDSYE IDGVTYEWSG DDYTGATIIF KHYCDFPTLF NGAKMGAYPH KNHTYYAQTW
IYSPKAQTVP FWISGHTWAT SDWRNGPASV PGKWFHADPK FFVNGREIAP PQWKKPRNSG
VMVDENYHFR EPSMVPLKKG WNRVLVKSPS NNSARRWMFT FVPVLVNPKT PGCNVKEYPG
LKFSTRPE
|
|---|
| |