| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1723 |
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| Symbol | |
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| ID | 6273701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 2100318 |
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| End bp | 2106179 |
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| Gene Length | 5862 bp |
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| Protein Length | 1953 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642613786 |
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| Product | outer membrane autotransporter barrel domain protein |
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| Protein accession | YP_001878322 |
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| Protein GI | 187736210 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain
[TIGR02601] autotransporter-associated beta strand repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0576481 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTGC ACCTCCCTTT AAGTCTTTTG TCCTCCCTGC TTGCCTGCAT GGCTGCTGTT
TCCTCACCGC ATGCCGTTGC GGAAACCTAT ACATGGCTGG GGGGGACGGT GGATGTTCAT
TTAAATACTA ACTGGACTCC GGATTACGGC AGCAGCAACT GGTCGGCAAC ATGGGCCGGA
ACGGCGACAA ACAGCATGCG TTTTGATGCG GGTAGCATGA CGGGGCAGGT CAAGGCTCTC
CAGGCTTCTT TCAATACGCT TTCACTTGGG GGAATAACCG TTACGGATAA TTCCGATGGA
TTCAGCGTTT CCAAAAGCAA CGGCTCCAAC CGCACCGTTA ATTTACGTGA TGGAGGAGAA
GGGTATACGC TGTTTGACAT AGGCGGGGAT TTTTCTCTGG GAGTTGCCAG CCAGGTATGG
AACGGAGTTG TTTTCAACTC CAGCGCCCTG TTTAACATTG CCTCCGGCAA GACCATGAAT
ATTTACGGTG GTCTGGGAAT GGCTGGAACG GGAGCCAGGA CGATGACGGT GGGGACGGAC
GGTTTTGCGG GAACCCTTAT CCTGAATACG GCTGCCCAGT CTTCCATGAC GGCTGATTGG
GTCATTTCCC ATGGGGCGAC CGTTCAACTG AACAATGCCG CGGCTTTGGG GTCCGGATCG
GTCAGCTTAA ACGGCGGCAA TATAACGGCC CAGCACGATG CTGTTTATAA CAATGCCCTG
GCCGTGAGCG GTTCTTCCGG CATGAACGTG AATGCTGCCA CGCGGTTTGC CAGTGTCAGC
CTTTCCAATG CCGCTGTCCT GAACATGAAC GGAGGGACGC TTGGCATTGC GAATGCCGGC
GTTTTGACAC TGGGTTCTTC AGGGACCATT ACGGGGAATT TGACGCTGGG AAACACGTCT
CTCCTGAATT TTTCCGCTCT TCCGGCTTCC GGATCATATT TGCTTAATGT AACAGGAACG
CTGACCGTGG GCAGTGAATT GCTTCTGGGG CAGGAAACGA TGGAAGGCGT AGCCTGGACG
GAGGGTTCCT ACAGTCTGGT TCATGCGGGT TCCGTAGAGG GAGTCCCTGC CAGCTCTTTC
GTTCTGGGCG ACAATCTTCT GGGTTCATGG AGCACGGAAA ACAATAATCT TACCCTGGTT
GTGGAGCAGG TGGCTTTGCT TGAATGGAAA GGCGGCGACG GGATATGGTC TGTAACTGCT
CCGGCTTCTT CACCGTGGAA AAATGAAGGT GTGTACAATA ATGCTTCCGG AGTGGTCATG
GGAGATATTG ACGGAAGTTC TCTGCAAACA GTAACCATTG ATGGAGTTGT CTCTCCCTCA
ATCATGATGG TCCAGGCGGA TACGACGGAT TATGTGTGGA ATGCCGCAGA TGAAGGAGGT
GCTCTGGAAG GCAGCGGTAA TCTGGAGAAG ACCGGCAGTG CCAAGCTGAC CATTAATATG
GATAATGCTG ATTATGCCGG AAAGGTCATT TTGGGGGGTG GAACGCTTGA AATGGGGAAT
GATGCCGCTT TAGGCACAGG TGATCTGGCA TTTGACGGCG GTACCCTCCG GTATGGAACA
GGGGTAACGG CGGATATTTC CGGGCAGATT TCCACAACGA GCAAAAGTTC CGTGAAGGTG
GATACCAACG GTAATAACGT AAGCTGGGCT TCCGCGGATC ATTACAAGGC TCTGAACTTG
GAAAAGTCCG GGAACGGTGT GTTGACTCTC GGCGGCGCCG TGTATACGGG GGGCCTGACA
GTAGATGAAG GAGGCGTGTC CATTACTTCC GGCAGTGTTC AAACGAAGTT TTCTGCGGGA
GTCACGGTAA ATGCAGGAGG AACGCTTGCC ATTTCCAGCG CCATTAACGG AATATCGACC
GGAGACAACG CCAATATCGT CATCAACGGC ATGAGCGGAG CGGGGCGGAT TGAGCTGGAC
AACCAGGCTG CCAAATCCCG TTTTTATATT TCCGGAGATA ATTCTTCCTT TACCGGGGAA
TTGGTGGCGA CCGGACTGAA CAATAATCCG GGAAATACGA ATGATGCCCG CGATCTTCAG
TTTGCCACTG CTGCCAGTAT GGGAAGAGGA ACGGTAACCC TGAATGGACG CGGGTTCTGG
CTGGGAACCG CCAATTCGGC GGATACCGCC GTCATGGCAG CAATCAATGT TCTGGAGAAA
GGTTCCTATC TGAACGGGGG AAGCGGAAAT TCCTATTACT TTGGCGGGGC GTTTACCGGT
TCCGGCACCA TGACCACGGC TCTGGGCAAT GCGTTCGCAT ATTTGACGGG AGATATGACC
GGGTTCCAGG GAGCATTCTC CCACACGGGT GATTCCCTGT TTACCTGGGC ATTCGGCAAC
AATACGGAGG CAGTTCTGAA TGATGGAAAG CTTTTCGGGG ATGGAGTGGT TTTGAAGGCT
GATGGAGGGA CAAGCCAGTT TAAATTCTCC TATACCAACG ATATTATACT GATGAACGCC
ACTGTAGGCG CAGAAGGGGC CTTGAACGCC AGGGTGGAAC AGGCCGGAAC CGGAACGCTG
GTGCTAACGC AGGACAATAG CGCGACGGGA ACGCTCACCA TTACCAGCGG CACGGTTCAG
CTGGGCAATG GAGAGGTTTC CGGCTCCTGG ACAGGGCAGA TTACCGGAGC AGGGGCTCTG
GTGGTGGACA GGTCTGCAGG TTCCTCTGCT CTGGAACTGA ACTCCGCCAA CGATTATCAG
GGTGGAACTA CGCTGAACGG CGGCACAGTG AAGGCGTTGG GCGCCGGTTC CTTGGGAACT
GGCGATGTTT TCGTCAACGG CGGTTCCATC CTGGATATGA ACGGACAGGC GATTGCCAAT
AATGTCGCTA TTACCAAAGG AGGGCTGCAA CATGCCGGGG CCTACGCCAC GTCGGGCGGC
GTAACCGTAA ATGCGGAGGC TGATTCCGGG GACATTGACC TGGGAGGCCT GTCCGGCGAC
AAAGTGGGGG GCATCAATAC CACCACGGCG GGAACGGCCA TTACCGGCCT GACGGGAAAT
TTGACGCTGA CGGGGAATAA TGCCCTGCAT GTGGGGGTGG AAAATACCAC GTATGCTTCT
GACGGAGACC AGAAAAGTCT GATTCAGTTC AATGATGCGG CTACGGGGAC TGTTTCCTTA
GGCGGAGATT CTTCCGATCT CACGCTGCAC ATGGATATTG ATACGGATAT CCTGATTGCC
ATGCGCGAAC TGGATTCTGT CGGTATCCTG CTGACAGACG GGACGATTAC CGGATTGCCG
GACAGCGGTC TGGTGGCGTG GCTCAACCAG CATCTTACGT TTAATGCCAC ACTGGAAAGC
CTGGGGTTCG GCATCCAGGG AGTGGATGGA GGAAACATTA TCATTTCCGG AAGAACGGAC
CAGATTTACA TTGCTTCCGT AGACGGTTCC TCAGTGACGG AAATTCCGGC TTTGAATTCC
TATGCCCAGG TGATTGTTGA TAAGGATCTT TCTCTGAATT TTGATGTTCC CGCATCTAAT
ACGGACAAGA CCATCGTTCG TCATCTTTCC TCCGGCACCA GCGCTACTGG CAATCTGGCA
GTGAATGTCG CCGGAGAAGG TTCCTTGAAT ATTGAACTGG CCAACGATTT GGACGATTCC
GTTTTTAACG GAAATCTTAT CGTAAACGGA AACGGTGCGG ACCTGGTCAA AACAGGAGAA
AAGACGCTGG TATTGAATGG GAGTGTCAGT ACATCCAATG CAGTGATTGC CAAAGAAGGC
ACACTGGTTC TGAACGGGAG CGTCAACAAC ATCGGCACGC TGGCTTTGGC CTCCGCTTCT
GCAGATGCAA TTGCGCGTAC CGTGATTGGT GGGACTGTCA CAGCCACTCT GTCGGATGAA
GATGAAGGCG GTTCCCTGGA GATTGCTGCG GGGGGAACAC TCAAGACCGC CGGAGATTCC
GTCCTGGACC AGGCGACCTC CATTTCCGGA GCAGGGAGTT TGAATATTCA GGAAGGTTCC
GCCCTCTCCC TGACGGGGAA AGCCGGCCTG TCCGGAACTT CCGTGACGCT GAACGGAACG
CTGGGTCTGT CCGGGACTGG GGAAAAATCC ATCCAGTCCC TCTCCGGTTC CGGAACGCTG
GCGTTGAACG GCGGCACTCT GTCTGTCACT TCCGCTTCCG CCAGAAACGG TTCTTTCTCC
GGTACGCTGG ATGGAGAGGG ACGTATTGAC GTATCCGGCA GCGTAACCCA GGTAATGCAG
ACAGGAAGCT CTACGTATGA CCTGGGCGTT CATGGAGGGG GGACGCTGGT ATTAAAAGGC
ACTTCTGCCG CCCCTGCGCT TGATTACCGT AATGTTGCAG TAGGTTCTGC CGGCACCCTG
CGTATTGAAG CCATTGGGCA TGAGGCCGGA GACTCCAATA CCTCCTTAAA CGTCGGCAGC
ATTGATTTTC AAAGCGGCTC TACGACGGAA TTCGTTTATA ATTTAAGTGC GTCTGATCCT
TTCGGCTCCG CTATGCTGAC GGCGGATTCC ATCACCATTG GAAATGGGGC GGGATTCTCT
CTTGCCAACA TGGAAGGCAA CACGGGGCTG GGAACGTATG ACAACCTGGA CGGCGTGGTG
CTGATGACAG CGGACACGAT TGACGGACTG ACGGAGGGGG AATCCATATC CGTGGGGACT
TCCGGCCTGT TTGCCGTTTA TTACAAGGAT GCGACCATGA GCCGGGAGGG CAATCATATT
GTGCTGAATG CCACGGTGCA GCAGGACAAT ATTTTTACGC CTGCGGTGAA TTCCCATAAT
TCCGGAGCAG GTTCCGAACT TCTGTGGGAG GCAAAAAATA ATCTGGATGC CACTTCCCAG
CTTGGGCAGG CGATGCATTC CATCAGCACC ATGATTACGG GAGATAATCC CGACTTGGCG
GGGGCATCCA GGGCTTTGGC AGCAGTGGCT GGGAGCACGG TCAACGCGCT GGGGACGGCA
CAGAGGGACG CCCTGCGCGA CCAGATGGGC TGGATCAGGA ACCGGACCAC CCTCATGGGC
GTCAACCCGG CCTACGTCAA CGACGACCTC CCCCGCTTCC ACATGTGGAT GGAAGGCACG
GGCTCCTACG CCAAGCTCGA CACCCGCGGG GATGAAAGCG GCTACCAGCT CACCACCTGG
GGAGGCACGG TAGGCATGGA CGCGGACCTC AGCGACCGCC TCACGGTGGG AGCGGCCTTC
ACGGCCGGCT ACGGCGACCT GACGGCCGGC GCGGCGGACA GCGCCGACGG GCACCTGGAC
AGCTACTACG CCAGCCTCTT CGGCCGCTAC CAGGACAGGC GCTGGGCGCA CACGCTCATC
CTGACGGGAG GGTGGAACGA CGCGAAACTC AACCGTACGG TCAACTATGG GGAAGGAAGC
TACGGGACGC AGGGAAGCAC CAGCGGGTGG GGCTTTGGAG CGATGTATGA ACTCACCTAC
GACGTATACC TCAACGAAAA CCGCAGCAGC GTGCTGCAGC CGCTGTTCAA CGCCTCGGTG
GTGACGACGC GGATGGACGG CTATGAGGAA ACGGGTGCGG GCAACGCGGG CCTGAACGTC
GGCAGGCAGG ACTGGACGAC GGGGACGCTG GCGCTGGGCG GCCGGTGGAT GGGCCTGGTG
GGCAGCAACA TCTTCGGACG AGAAGCGCTG GCGGAAATCC GAGTAAACGC GGCGCAGGAC
CTGGGAGACC GGAGAGGGGA AACGAACGTC TCTCTGCTGG GCAACCCCGG CTTTGCGCAA
AGCGTGAGGG GGGCGAAAGA GGGAACGACG GCGCTGCAGC TGGGAGCCGG ACTGAGCGTG
CCTGTAGGAA CGAAGGGAAC CATCTACGTG AACGGGAACG CGGACATCCG TGACGGGTCC
AGCGCACTGA ACGGAAGCGT CGGCTACCGC TACGACTTCT AA
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| Protein sequence | MKLHLPLSLL SSLLACMAAV SSPHAVAETY TWLGGTVDVH LNTNWTPDYG SSNWSATWAG
TATNSMRFDA GSMTGQVKAL QASFNTLSLG GITVTDNSDG FSVSKSNGSN RTVNLRDGGE
GYTLFDIGGD FSLGVASQVW NGVVFNSSAL FNIASGKTMN IYGGLGMAGT GARTMTVGTD
GFAGTLILNT AAQSSMTADW VISHGATVQL NNAAALGSGS VSLNGGNITA QHDAVYNNAL
AVSGSSGMNV NAATRFASVS LSNAAVLNMN GGTLGIANAG VLTLGSSGTI TGNLTLGNTS
LLNFSALPAS GSYLLNVTGT LTVGSELLLG QETMEGVAWT EGSYSLVHAG SVEGVPASSF
VLGDNLLGSW STENNNLTLV VEQVALLEWK GGDGIWSVTA PASSPWKNEG VYNNASGVVM
GDIDGSSLQT VTIDGVVSPS IMMVQADTTD YVWNAADEGG ALEGSGNLEK TGSAKLTINM
DNADYAGKVI LGGGTLEMGN DAALGTGDLA FDGGTLRYGT GVTADISGQI STTSKSSVKV
DTNGNNVSWA SADHYKALNL EKSGNGVLTL GGAVYTGGLT VDEGGVSITS GSVQTKFSAG
VTVNAGGTLA ISSAINGIST GDNANIVING MSGAGRIELD NQAAKSRFYI SGDNSSFTGE
LVATGLNNNP GNTNDARDLQ FATAASMGRG TVTLNGRGFW LGTANSADTA VMAAINVLEK
GSYLNGGSGN SYYFGGAFTG SGTMTTALGN AFAYLTGDMT GFQGAFSHTG DSLFTWAFGN
NTEAVLNDGK LFGDGVVLKA DGGTSQFKFS YTNDIILMNA TVGAEGALNA RVEQAGTGTL
VLTQDNSATG TLTITSGTVQ LGNGEVSGSW TGQITGAGAL VVDRSAGSSA LELNSANDYQ
GGTTLNGGTV KALGAGSLGT GDVFVNGGSI LDMNGQAIAN NVAITKGGLQ HAGAYATSGG
VTVNAEADSG DIDLGGLSGD KVGGINTTTA GTAITGLTGN LTLTGNNALH VGVENTTYAS
DGDQKSLIQF NDAATGTVSL GGDSSDLTLH MDIDTDILIA MRELDSVGIL LTDGTITGLP
DSGLVAWLNQ HLTFNATLES LGFGIQGVDG GNIIISGRTD QIYIASVDGS SVTEIPALNS
YAQVIVDKDL SLNFDVPASN TDKTIVRHLS SGTSATGNLA VNVAGEGSLN IELANDLDDS
VFNGNLIVNG NGADLVKTGE KTLVLNGSVS TSNAVIAKEG TLVLNGSVNN IGTLALASAS
ADAIARTVIG GTVTATLSDE DEGGSLEIAA GGTLKTAGDS VLDQATSISG AGSLNIQEGS
ALSLTGKAGL SGTSVTLNGT LGLSGTGEKS IQSLSGSGTL ALNGGTLSVT SASARNGSFS
GTLDGEGRID VSGSVTQVMQ TGSSTYDLGV HGGGTLVLKG TSAAPALDYR NVAVGSAGTL
RIEAIGHEAG DSNTSLNVGS IDFQSGSTTE FVYNLSASDP FGSAMLTADS ITIGNGAGFS
LANMEGNTGL GTYDNLDGVV LMTADTIDGL TEGESISVGT SGLFAVYYKD ATMSREGNHI
VLNATVQQDN IFTPAVNSHN SGAGSELLWE AKNNLDATSQ LGQAMHSIST MITGDNPDLA
GASRALAAVA GSTVNALGTA QRDALRDQMG WIRNRTTLMG VNPAYVNDDL PRFHMWMEGT
GSYAKLDTRG DESGYQLTTW GGTVGMDADL SDRLTVGAAF TAGYGDLTAG AADSADGHLD
SYYASLFGRY QDRRWAHTLI LTGGWNDAKL NRTVNYGEGS YGTQGSTSGW GFGAMYELTY
DVYLNENRSS VLQPLFNASV VTTRMDGYEE TGAGNAGLNV GRQDWTTGTL ALGGRWMGLV
GSNIFGREAL AEIRVNAAQD LGDRRGETNV SLLGNPGFAQ SVRGAKEGTT ALQLGAGLSV
PVGTKGTIYV NGNADIRDGS SALNGSVGYR YDF
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