| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1705 |
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| Symbol | |
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| ID | 6274333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 2071161 |
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| End bp | 2071631 |
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| Gene Length | 471 bp |
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| Protein Length | 156 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642613764 |
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| Product | Endoribonuclease L-PSP |
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| Protein accession | YP_001878304 |
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| Protein GI | 187736192 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.182301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0000000000000067862 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTCTATA TGGATAAAAT ACGTCAACGA CTTTCCGACC TTGGTTACGC CATTTACGAT
GCTCCCGCTC CCGTAGGCTC CTATGTGCAA TGCGTACGCA CGGGCAACCT GCTTCACCTC
TCCGGCGGCA TTTCCGTGAA CGGGGACGAC AAATACTTTG GCAAAGTAGG GCAGGAGCTG
ACGGTGGAAG AAGGTCAGGC CGCTGCGCGC GCCGCTATTT TGAATCGTCT GGCCGTTATT
GTGCAGGTGG TGGGGTCTCT GGAAAAAGTA TCCCGAATCG TGGCCGTGAA CGGATTTGTG
AATGCCGGCC CGGATTTTTA TGACCATCCT AAAGTATTGA ATGGCGCATC CGACCTGCTG
GTGGAAGCCT TTGGAGAAAT TGGCCGCCAC AGCCGTACGG CGGTAGGCGT ATCCGCCCTG
CCGCTCAATG TAGCGGTGGA AATCAGCATG GTGGTGGAAG TTCGTGATTA A
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| Protein sequence | MLYMDKIRQR LSDLGYAIYD APAPVGSYVQ CVRTGNLLHL SGGISVNGDD KYFGKVGQEL
TVEEGQAAAR AAILNRLAVI VQVVGSLEKV SRIVAVNGFV NAGPDFYDHP KVLNGASDLL
VEAFGEIGRH SRTAVGVSAL PLNVAVEISM VVEVRD
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