| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1685 |
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| Symbol | |
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| ID | 6275725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 2046109 |
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| End bp | 2048115 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642613744 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_001878284 |
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| Protein GI | 187736172 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0732988 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.758738 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGGCA GGGGGATGCC TGCCGTATTT GACGGTTTTG TGGAACGCTG GAACAGGGCC
GTGGAACGGG AACTGCGCCG TGAATTGGCT GAAGGGGAGA GGAAGGAAAA ACTTCTGGTC
GTTTCCCGCG GGGAAGGGGA CGGCCGGCGT TTGGCGGAAC AGGCTCGTTC CGTGGAACGC
ATCAGGAAAA GGCTGTTATT GAAAGACCAT ATCCGCCTTC TTCCTTTGGA AGACGTTCCG
GACGGATTGG AATGGCAAAC CGGAATGGAA GAGCCGGATG TGGGTGATCC GCGCGCCGTC
AAGGGTGGAA AAGTCCGGCT GTGGATCAAT ACTCCGTTTC CCGGAACTTT GCGTGCTTTC
GGGCCGGGAA GTGAAAATTT TTTCAATTAT TCCGCCATTG ACAACGTGTG GCTTCCCCTC
GTGGGGCTTC ATCCGGAAAC CTTCCGTCCC ATTCCGGGCC TGGCGGACCG CTGGGCTTTG
TCCGCAGACG GAAAAACCGT TTTTTATCAT CTGGATCCGG AAGCGGCCTA TTCGGACGGA
CGCATCGTGA AAGCGCAGGA TTTTCTGCTG AACATTTGCC TCCGTACGTC CGGTTTTGCC
CGGGATCCGT TCTGGACTAC CCTGTTCCGT TCCATGTATG ATCAGATTAC GGTATACGGG
GATTCCGTCA TTGCCCTTAC GCTGCCGTCC CGCGGGCCGC TGCTGCCTTA CATGGCCTGT
GCGGATTTTC ATCCGGCCCA TCCCGGTTTT TACCATGATT TCAACGCTCT GTTTCTGGAA
CGCTACCAGT GGAAAGTCCC TCCAAATACG GGTGGCTACA TGGTTGTTCC CTCTAAAATC
CGGATAGGAG AAAGCATTAC CCTGGCCCGC GTGAAAAATT GGTGGGCGAA GGAGAGGAAG
TATTACCGCC ATTCCTGCAA TGCGGACCAG GTGGAACATG TGTTTGTGAA CATGGAAAAC
AAGGCGGTTG AAATGTTCCG CCGCGGGGAA CTGGACATCA TGAACGTTCG CAAGCCGGAG
GTGTGGGAAA CCGGGCTGGA GCTGCCGGAA GTGCACCGGG GCTATATAGA TAAATACAGC
CTGGAAGCCA ATTACGCCTG TCCCCCGTAC GGACTGTATC TGAATTGCTC GGACAAGTTG
TTGAAAAATC CGGATATCCG CCGCGGTCTG GCGCATTCCG TGAACATGGG CCTGGTGATT
GATACTTTGT TCCGCGGGAA TATGAGAAGG CTCGGTTCCT ACATGGAGGG GTACGGAGAC
CTGACTCTTC CGTTGAAAGC TCCGGAATAC AGCAAGAAAA AAGCCATGGA ATATTTTGCC
CGCGCCGGCT ACCGGGAAAT GGGGACTGAC GGAGTGCTGA AAAATGAACG GGGAGAGCGG
CTGGTGGTGG AACTGACGTT TGCGGATTCA TCCACCCTGA TGACCAACGT CTGTTCCATC
CTCCGGCAGG AGGCCCTGAA GTGCGGGGTG GACCTGCGTC TGGATTCCCT TACCTACAGT
GTCTGTTCCC GTAAGGTTTT TGAAAAACGG TATCAGGCGG CTCTATGGGC GTGGCCGCTG
CAGACGCCGT TCCCCCGGCT GTATGAAACA TTCTCTTCCG AACTGGCGTA TGATGCCCGC
GGAAATCCCG TAGGCAATAC GAATAATATT ATGGCCGTGT CGGACGCTGG ACTGGATGCC
GCCCTGGATG CGGAACGCAA TGCCCCGGAT ACCGGTTCCC TGAAACTGGC CCTTCACCGT
GCCCAGCAGC GTCTTCATGA ACTTTGCGTC TGGATTCCCG GCTGGAGGGA ACCCTACACG
CATATCGCCT GCTGGCGCTG GATACGCTGG CCGGAATCTC CCACCCGGTT CTGTTCCCCC
AGAATTTACA ATCCGCTGGA GTCGCATCTG TACTGGGTGG ATGAAGAAAT GAAGAAGGAG
ACGCTGGAGG CTCGGAGCCG GGGCGTACCG TTTGAGGAAA AGCATCAAAT AATATATCTT
GAAAGACAGG ATGGTGCCGC TCCGTAA
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| Protein sequence | MDGRGMPAVF DGFVERWNRA VERELRRELA EGERKEKLLV VSRGEGDGRR LAEQARSVER
IRKRLLLKDH IRLLPLEDVP DGLEWQTGME EPDVGDPRAV KGGKVRLWIN TPFPGTLRAF
GPGSENFFNY SAIDNVWLPL VGLHPETFRP IPGLADRWAL SADGKTVFYH LDPEAAYSDG
RIVKAQDFLL NICLRTSGFA RDPFWTTLFR SMYDQITVYG DSVIALTLPS RGPLLPYMAC
ADFHPAHPGF YHDFNALFLE RYQWKVPPNT GGYMVVPSKI RIGESITLAR VKNWWAKERK
YYRHSCNADQ VEHVFVNMEN KAVEMFRRGE LDIMNVRKPE VWETGLELPE VHRGYIDKYS
LEANYACPPY GLYLNCSDKL LKNPDIRRGL AHSVNMGLVI DTLFRGNMRR LGSYMEGYGD
LTLPLKAPEY SKKKAMEYFA RAGYREMGTD GVLKNERGER LVVELTFADS STLMTNVCSI
LRQEALKCGV DLRLDSLTYS VCSRKVFEKR YQAALWAWPL QTPFPRLYET FSSELAYDAR
GNPVGNTNNI MAVSDAGLDA ALDAERNAPD TGSLKLALHR AQQRLHELCV WIPGWREPYT
HIACWRWIRW PESPTRFCSP RIYNPLESHL YWVDEEMKKE TLEARSRGVP FEEKHQIIYL
ERQDGAAP
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