| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1679 |
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| Symbol | |
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| ID | 6275680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 2037145 |
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| End bp | 2037960 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642613738 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_001878278 |
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| Protein GI | 187736166 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.917084 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACTC CACACAAATG CCGCGTTCCA GGCCTCAACA TCGGATGCAC CTCCTTCATC
ATCCCGGACT ACTACGTGCC CGCCATCAGG GAATGCGTCC ATTACGCGGA TGATGTCGCT
CTGCTCCTGC TGGAAGCCGG AGAATGCGGA AAGGAACTCA TTACCCCTGC GGAAATACGG
GAACTGGCCG GAATCGCTGC AGATGCCGGG GTTACCTGGA ACGTCCACCT GCCTACGGAC
GGCAGCTTCG CCACGGAAGA ATCAAGCCGC CGTTATACGG AAAACATCAT TCGCGCCATT
GACCTGACAC GGGAACTGGA GCCCCACACC TGGGTCATGC ATGTGGTCAC GGACCATATC
CCCGGTCCTG ATATGCGCCC CCATCTTACG GAACGCGAAA CGGAACGAAT CCTCCGGAGT
CTGGAACAAA TCACGCCCCA CCTCCCCGCA CCGGAATGCC TGGCCCTGGA AAATTTGGAA
CGCCATCCGA CCGACTATCT GGATAAACTG GTAGCCGCTA CACCCCATTC ACGTTGCTTT
GACATAGGCC ATGTCTGGAA AGAAGGCCTG CGGCCGGAAA AACTTCTGCC GCTCTGGCTG
CCGGACATAC GCATGTGCCA CCTGCACGGG CTGGAAAAAC GGGACCACAA ATCCCTGCAC
CACATGCCTG CCGCTACGCT GGACGCCATT CTGCACCCCA TGTGGGACCT TCATTTCTCC
CCCCTTATTA CGCTGGAAGT CTTCAGCCTG GATGACTTCC TGAACTCCCA CCAGGCCATG
CTGGAATCCC ATGAACGCTA CATCACCAAA CACTGA
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| Protein sequence | MKTPHKCRVP GLNIGCTSFI IPDYYVPAIR ECVHYADDVA LLLLEAGECG KELITPAEIR
ELAGIAADAG VTWNVHLPTD GSFATEESSR RYTENIIRAI DLTRELEPHT WVMHVVTDHI
PGPDMRPHLT ERETERILRS LEQITPHLPA PECLALENLE RHPTDYLDKL VAATPHSRCF
DIGHVWKEGL RPEKLLPLWL PDIRMCHLHG LEKRDHKSLH HMPAATLDAI LHPMWDLHFS
PLITLEVFSL DDFLNSHQAM LESHERYITK H
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