| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1653 |
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| Symbol | |
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| ID | 6275694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 1996583 |
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| End bp | 1997236 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642613712 |
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| Product | Ribulose-phosphate 3-epimerase |
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| Protein accession | YP_001878253 |
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| Protein GI | 187736141 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
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| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.123054 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATAA TCTCCCCGTC CCTGCTGGCC GCTGATTTCT CCCGCATTGG GGAGGAAGCG
CGGCGGGCCT TTGACGCCGG TGCCGACTGG CTGCATCTGG ACATCATGGA CGGCCACTTT
GTGGACAACA TCTCCTTTGG CCCGGAAATC TGCGCCGCCG TCAGAAAAGC GGTGGGGCCG
GACCGCTTTC TGGATGCCCA CCTGATGATA GAACGGCCGG ACCACTACTT TGACCGCTTC
GTCAGGGCAG GTGTGAACCT CATCTGCTTT CACGTGGAAC TGGGAGACTC CTACTACATT
CGCAACACAC TCGGGCGAAT CCGGGAAGCC GGAGTAAAAA ACGGCCTGGC TCTCAACCCG
GCCACACCCT TTGAAGCCGT AGAACCTTAC CTGGCGGAAA TAGACCTGCT GCTGGTCATG
TCCGTAGTGC CTGGCTTCGG CGGCCAGTCC TTCATGCCTT CCGTATTGGA CAAGGTGGAA
AAAGCCGCCG AATGGCGCAC GGAAAACCGC GCCTCCTTCC TCATTCAAAT GGACGGAGGA
ATTGGCCAAA ACAATGCCGC TCAGTGCGCT CTGGCCGGAG CGGATGTGCT GGTGGCAGGC
TCCTCTACCT TCAAGGCTCC GGATATGGCC CACGCCATTG CGGAAATGAA ATGA
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| Protein sequence | MTIISPSLLA ADFSRIGEEA RRAFDAGADW LHLDIMDGHF VDNISFGPEI CAAVRKAVGP
DRFLDAHLMI ERPDHYFDRF VRAGVNLICF HVELGDSYYI RNTLGRIREA GVKNGLALNP
ATPFEAVEPY LAEIDLLLVM SVVPGFGGQS FMPSVLDKVE KAAEWRTENR ASFLIQMDGG
IGQNNAAQCA LAGADVLVAG SSTFKAPDMA HAIAEMK
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