| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1616 |
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| Symbol | |
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| ID | 6274688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 1942800 |
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| End bp | 1944266 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642613676 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001878217 |
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| Protein GI | 187736105 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTCCG TCCCAGGCCT CCTTTCCGTT TTCTTGATCG CAGCCGGTGT CGCATGTGCG
GAGCTTCCGC CCGACCTGCC GCCGGCGTCT CCCCTTCCCT TTGCTCCCGG CCCGGTCATC
GGGGGAACCA TCAAGGGAAA CCCGGCCGCC GGCATCGTTC CCGTCAAAGA CCTGATTGAA
GCCAACCGCA AGGATGAATA CATCCCCATG GCGGAACCCA TTCCCGGAGA GACAGGCTCT
TCCGCTCCCC TGGCGGAGTC CATCCCTAAC GCGGAACCCA TTCCCGGGGA AACGAACCTG
CACGCCCCGG TACAACCTGC GGAGGCACCC CTTGCCATTC CCTCCACGGC TTTTTCCCCC
GTTCCGGTTC CTCAGCCTGA AACCCGCGTA GCCATTCTGG GTTACCATGA TTTCAGCCGC
ACCCTTCCCG CTACGGAAAT GCGCATGAAT ACGGATGTAT TCCGCTCTCA GATGCAGGCG
CTGAAGGCGT CCGGAGTGCC CGTCATCTCC ATGAAGGAAT TCCTGGAATG GAAACTGGGG
GACAGGCAGC TTCCGGCCAA ATGCGTCATG ATCACCATCG ATGACGGCTG GAAGAGCGTC
TACACGGACG CCTATCCCAT CCTGAAAGAA ACGGGATTCC CCTTTACCAT TTTCCCATAC
ACCAAATTCA TCACGGGCCG CGGTTCTGCC ATGAGCCCCG CCCAGATTCA GGAAATGCTG
AATAACGGCG CCACCCTGGG CAGCCACTCC GTCAGCCACC TGTACCCAAG ATCCTGGAGG
GCCGCCCAGC GGAAAGGTAC ACAAGCGGTT CTGGATCTGG CAACGGCGGA AATAGGCAAT
TCCCGGAAAA TCCTTCAGGA AAAATTCCCC GGTTCTTCCG TGGAGGCCTA TTGCTATCCT
GGCGGCTTCA TCCTGCCGGA AATGATCTCC AAGGCGGAAG ACGCCGGATT CCAGGCGGCC
TTTACGGTAA TCCCCAAAAA AGTGACCAAG GACACGGACC GCTGGCGGAT TCACCGCTAC
ATGGTCTTCG GCAAAGACCC TAAGACATTT ACCAGAGCCC TGAATTTCAA CGTTCCCTCC
ACTCCGGAAA CTCCGGCGGC CACCCCTGGC AACAGCAGCG GGAAAAAGAT GAATTCCTAC
CCGGCCCCGG CCCAGCCCGT TTATCCGGCC GCCAATACCG TGGTGAAAAA CCAGACTCCC
GATATATCCA TTTCCCTGGC AGGGGAACCC TCCTTGGAAC CCAAGCAAAT GGAAATGCGC
GTCTCCGGCT TCGGCCTGGT AAACGCCCGG TACGACGCCA AGGAAAAAAT TTTGAAATGG
ACTCCCTCCC GTCCCCTGCG GCTCAGCCCC GTAACCGTCC AGGTCCGTTG GAAAAATCCT
GCTGTCAACA TGTGGCAAAC GGCCACCTGG CAATTCGGCA TCGAGGAACA GGAAATGCAC
TTCACTCCCC GGAACATAGT CAAATAG
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| Protein sequence | MRSVPGLLSV FLIAAGVACA ELPPDLPPAS PLPFAPGPVI GGTIKGNPAA GIVPVKDLIE
ANRKDEYIPM AEPIPGETGS SAPLAESIPN AEPIPGETNL HAPVQPAEAP LAIPSTAFSP
VPVPQPETRV AILGYHDFSR TLPATEMRMN TDVFRSQMQA LKASGVPVIS MKEFLEWKLG
DRQLPAKCVM ITIDDGWKSV YTDAYPILKE TGFPFTIFPY TKFITGRGSA MSPAQIQEML
NNGATLGSHS VSHLYPRSWR AAQRKGTQAV LDLATAEIGN SRKILQEKFP GSSVEAYCYP
GGFILPEMIS KAEDAGFQAA FTVIPKKVTK DTDRWRIHRY MVFGKDPKTF TRALNFNVPS
TPETPAATPG NSSGKKMNSY PAPAQPVYPA ANTVVKNQTP DISISLAGEP SLEPKQMEMR
VSGFGLVNAR YDAKEKILKW TPSRPLRLSP VTVQVRWKNP AVNMWQTATW QFGIEEQEMH
FTPRNIVK
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