Gene Amuc_1592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1592 
Symbol 
ID6275651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1915359 
End bp1916003 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content55% 
IMG OID642613652 
ProductSuperoxide dismutase 
Protein accessionYP_001878193 
Protein GI187736081 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0605] Superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAAC AGCAAGCCCC CTCCACGATC GGCTATGCCG ACGGCAAATA TGTACTGCCA 
CCCCTTCCGT ACGCCTACGA CGCGCTTGAA CCCATGCTGG ATGAAAAAAC CGTGCGCATC
CACCACGACA AGCATCATGC GGCCTATGTC GCCGGAGCCA ATGCCGCGGC TGAAAAGCTC
CGTGAAATTG CGGACGGGAA ACTGGACGCT TCCGCCACCA CCAACTGGGT GCGTAACTTG
TCCTTCAATG CTTCCGGCCA TGTTCTCCAT ACCATTTACT GGACCAACAT GACGCCTGAT
CCCAAAAAAG AGCCGCAAGG TCCTCTGGTA GATGCCATCA AGGAAAAATT CGGTTCTCTG
GAAGCTATGA TGAAGGAATT CAAGGCGGCT TCCCAGGGCG TGGAAGGTTC CGGCTGGGGC
ATTCTGGGCG TGGACCCCAT CAGCAAGACG CTGGTAATCT GCGGGGCGGA AAAACATCAG
AATCTGGAAA TTCCCGGTCT CGTCCCCATT CTCGTCTGTG ACGTTTGGGA ACACGCCTAT
TATCTGAAGC ACCAGAACCT CCGGGCGGAC TATATTGAAG ACTTCTGCCG CCTGATCAAC
TGGGACGATG TGGAACGCCG CTACCAGGAG GCTATGGCTT CCTGA
 
Protein sequence
MTKQQAPSTI GYADGKYVLP PLPYAYDALE PMLDEKTVRI HHDKHHAAYV AGANAAAEKL 
REIADGKLDA SATTNWVRNL SFNASGHVLH TIYWTNMTPD PKKEPQGPLV DAIKEKFGSL
EAMMKEFKAA SQGVEGSGWG ILGVDPISKT LVICGAEKHQ NLEIPGLVPI LVCDVWEHAY
YLKHQNLRAD YIEDFCRLIN WDDVERRYQE AMAS