| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1536 |
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| Symbol | trpA |
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| ID | 6273674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 1838487 |
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| End bp | 1839275 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642613595 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_001878138 |
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| Protein GI | 187736026 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.201624 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATAATA TGCAGAAATC ACCGTTGCAG AAAGCCGTGG AGAGGGCCCA TGCCCTCGGC
AGGCGTGCCG TTATCCCTTT CATTACCGCC GGATTCCCGG ACAAGGAATC CTTCTGGACG
CACTTGTCCC GTATTGACGA AGCCGGGGCG GATATTATTG AGATAGGAGT TCCCTTCTCG
GATCCCGTAG CGGACGGCCC GGTTATTGAA CAGGCATCCC GGGATGCCCT GGCCCGCGGC
GTCAGCCTGA AATGGATTCT GGACGGTCTG AAAGCCCGCA AGGGCGGTTT TTCAGCCGAA
CTGGTGCTGA TGGGATACGT AAATCCCTTT TACCAGTATG GCCTGGAACA GCTTGCCCTG
GATGCGGAGG AGGCGGGCGT CAGCGGTTTC ATCGTACCGG ATATGCCGCT GGAGGAATCC
GGAATGTTCC GGGAGGCTTT CAGCCCCCAT GGCCTGACGC TCGTCACTCT GGTGGCTCCC
AATACTTCCG TGGAACGCAT GCGGGAATAC AAGCCTTATA CTTCCGGCTT CGTTTATGTG
GTCTCCGTGC TGGGAACCAC CGGTGGGAAA GCCAACCTGG AGCGGAGCGT TACGGAAACC
ATGCGCCGTG CCCGGTCCGT TTTTGATGTG CCGCTGGCGC TGGGCTTCGG GCTTCAGACG
CCGGACCAGC TGGAGACGCT GCCTGAAGAT GCCCGGCCGG ATGCCGCCGT GCTTGGGAGC
GCTCTGCTCA GGCACATTGG AGAAGGGAAG GACGCCGGGG AATTTTTGGA AAAATGGACC
AGAGGTTGA
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| Protein sequence | MNNMQKSPLQ KAVERAHALG RRAVIPFITA GFPDKESFWT HLSRIDEAGA DIIEIGVPFS
DPVADGPVIE QASRDALARG VSLKWILDGL KARKGGFSAE LVLMGYVNPF YQYGLEQLAL
DAEEAGVSGF IVPDMPLEES GMFREAFSPH GLTLVTLVAP NTSVERMREY KPYTSGFVYV
VSVLGTTGGK ANLERSVTET MRRARSVFDV PLALGFGLQT PDQLETLPED ARPDAAVLGS
ALLRHIGEGK DAGEFLEKWT RG
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