| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1535 |
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| Symbol | |
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| ID | 6273675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 1837301 |
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| End bp | 1838473 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642613594 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_001878137 |
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| Protein GI | 187736025 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0133] Tryptophan synthase beta chain |
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| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.442793 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAG AAGGATATTT CGGCAATTTC GGCGGCCGCT TCGTACCGGA AGCGCTGCGC
CCCCCGCTCA TGGAGCTGGA GGAAGCCATG GACTCCATCA TGCCGTCCAG CGAGTACCGG
GATGCGCTTC AGGATCTGCT GGTCAATTAC GCGGGCCGTG AAACTCCCCT CACGTTCTGT
CCCCACCTTT CGGAAAAACT GGGCTTCCGC CTGTGGCTGA AACGGGAGGA CCTGCTGCAC
ACCGGAGCCC ACAAAATCAA TAACGCCCTC GGCCAGGCCC TTCTGGCCAA AATGATGGGG
AAAACGCATC TTATTGCGGA AACCGGGGCG GGGCAGCACG GCGTGGCTAC GGCTACGGCG
GCCGCCCGGC TTAAAATGGA CTGCACCATC TTTATGGGCG CAGAGGATGT AGAACGCCAG
TCCATGAACG TTATGCGCAT GAAATTGCTG GGAGCGACGG TTTTTCCGAT TGAGAGCGGT
TCCCGCACGT TGAAGGATGC CATTAACGAG GCTCTCCGCT ACTGGATTTC CCATCAGGCG
GATACTCTGT ATTGTTTCGG TACGGCGGCG GGCCCCCATC CGTTCCCCAC ATTGGTCAGG
CAGCTTCAAT CCGTCATTGG GCGGGAGGCC CGCGCCCAGA TGCTGGAGCG TGCAGGCAGG
CTGCCGGATG TGGTGGTGGC ATGCGTGGGC GGCGGCTCCA ATGCCATCGG CATGCTTCAC
CCCTTTGTGG AGGATGAAGG CGTCCGTCTG GTAGGGGTTG AGGCGGGAGG CACCGGTGAG
CCCGGCTGTT ATAACTCCGC CCCCATCAAT CTGGGCAGCC CCGGCGTGCT GCACGGTCAT
GTGACCATGC TGTTACAGGA TGAGAACGGG CAAATACAGC CGTCCCATTC CATTTCCGCC
GGGCTGGACT ATCCCGGGGT AGGCCCGGAA CATGCCTATC TGGCGGAAAC GGGCCGTGTC
CATTACGGTG TGATTTGCGA CGCCTCTGCT TTAAACGCTT TCCGGACGCT CACCAGAGAG
GAAGGAATCA TTCCTGCGCT GGAATCCTCC CATGCCGTGG CCTGGGTGCT GGACCATGCG
GAGGAACTGC CGCAGGGGGG GGACGTCCTG GTCAATCTCT CCGGCCGCGG AGACAAGGAC
CTGGGAATCG TTAAAAAATA TTTGAATCTT TAA
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| Protein sequence | MKKEGYFGNF GGRFVPEALR PPLMELEEAM DSIMPSSEYR DALQDLLVNY AGRETPLTFC
PHLSEKLGFR LWLKREDLLH TGAHKINNAL GQALLAKMMG KTHLIAETGA GQHGVATATA
AARLKMDCTI FMGAEDVERQ SMNVMRMKLL GATVFPIESG SRTLKDAINE ALRYWISHQA
DTLYCFGTAA GPHPFPTLVR QLQSVIGREA RAQMLERAGR LPDVVVACVG GGSNAIGMLH
PFVEDEGVRL VGVEAGGTGE PGCYNSAPIN LGSPGVLHGH VTMLLQDENG QIQPSHSISA
GLDYPGVGPE HAYLAETGRV HYGVICDASA LNAFRTLTRE EGIIPALESS HAVAWVLDHA
EELPQGGDVL VNLSGRGDKD LGIVKKYLNL
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