| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1498 |
|---|
| Symbol | |
|---|
| ID | 6275664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | - |
|---|
| Start bp | 1788187 |
|---|
| End bp | 1788876 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642613558 |
|---|
| Product | protein of unknown function DUF152 |
|---|
| Protein accession | YP_001878101 |
|---|
| Protein GI | 187735989 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1496] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00726] uncharacterized protein, YfiH family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 0.0635016 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACGC CAGCATTCTT GAAGCCTATC CAGTCCTATC CCGGAGAAAT CGTCCAATTC
ATTGAGAGAA TTCCGGGAGT AGACGTCGCC GGAGACCGCG AAACCGTGCT GGAACGGCTG
GAACCGTACC ATAAGGCGGA AGTGGAAGCC CTGGGCTGGC GGTGGAAAGA CCTGCGCCGC
GCCGAACAGG TGCACGGCAC GAAAGTTGCC CTGGTGGGGG ACATCGGCTC CAATTATCCT
GTGGAAGGCG TGGACGGCCT GATTTGCTCC GGAGTTTCCG ACTGCGTGCT TGCCATTTAC
GTGGCGGACT GCGCCGCCGT GTGGTTGTAC GACAAGGAAA ACTGCCACCG TTCCCTGATT
CATTCAGGCA AGGCGGGAAC CGCCGGCAAC ATCGTTTCCA ACACCATCAA GTCCATGAAA
AAATGCCTTG GGGTGGAACC GTCCAACCTG ATTGCCGTCA TTTCCCCCTG TATCCGCCCG
CCTCATTATG AGGAAGACAT TCCTACGGCC ATTAAGGCAC AGCTCATTGA AGCGGGGGTA
CCGGAAGAAC AGATTCATGA TTCCGGGCTG GACACGGCGG AGGATACCAA ACGTTTTTAC
TCCTACCGCA TGGAAAAAGG GCAAACGGGC CGCATGCTGG CCCTTTTCGG CCCGGATCAC
GCTACGCGGA CGCACGCAAT TATTCTTTAA
|
|---|
| Protein sequence | METPAFLKPI QSYPGEIVQF IERIPGVDVA GDRETVLERL EPYHKAEVEA LGWRWKDLRR
AEQVHGTKVA LVGDIGSNYP VEGVDGLICS GVSDCVLAIY VADCAAVWLY DKENCHRSLI
HSGKAGTAGN IVSNTIKSMK KCLGVEPSNL IAVISPCIRP PHYEEDIPTA IKAQLIEAGV
PEEQIHDSGL DTAEDTKRFY SYRMEKGQTG RMLALFGPDH ATRTHAIIL
|
|---|
| |