| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1436 |
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| Symbol | |
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| ID | 6274593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 1722304 |
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| End bp | 1723293 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642613495 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_001878039 |
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| Protein GI | 187735927 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0039] Malate/lactate dehydrogenases |
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| TIGRFAM ID | [TIGR01757] malate dehydrogenase, NADP-dependent
[TIGR01759] malate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.756645 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAACAC CTATCACCGT TACCGTTACA GGAGCCGCCG GCCAAATTGC CTATTCCCTT
CTGTTCCGTA TTGCCTCCGG CAGCATGCTG GGGCCGGATC AGCCGATCAA CCTGCGCCTG
CTGGAAATTC CCCCGGCCAT GAATGCTCTG GAAGGGGTGG TGATGGAGTT GCGTGACGCC
GCGTTCCCGC TGGTTAATGA AATTGTCCCG ACCAGCGATC CTGATGAAGC GTTCGCCGGC
GCCAACTGGT GCCTGCTGGT AGGCTCCGTT CCCCGCAAGG CCGGTATGGA ACGCAAGGAC
CTGCTGGATA TCAACGGCAA GGTGTTCATC GGCCAGGGGC AGGCCATTGC CCGCAGCGCC
GCCAAGGATG TGCGTGTGCT GGTGGTCGGC AACCCCTGCA ATACGAATGC CCTTATTGCC
ATGCACAATG CGAGCGGCGT TCCCTCCGAC CGCTTTTTTG CCATGACTCG CCTGGATGAA
AACCGTGCCA AGAGCCAGCT TGCGGAAAAG GCCGGCGTCC ATGTGACGGA AGTGACCAAC
ATGGCCATCT GGGGCAATCA TTCCTCCACC CAGTACCCTG ATTTCACCAA CGCCAGGATT
GGCGGAAAGC CTGTGACGGA AGTCATCAAG GATACGGAAT GGCTTAAGGG CGATTTCATT
ACCACCGTGC AGCAGCGCGG TGCCGCCATT ATCAAGGCAC GCGGCGCTTC TTCCGCCGCT
TCCGCCGCTT CCGCAGCCGT GGATACCGTC CGCAGCCTGG CTACCCAGAC TCCGGAAGGC
GACTGGTATT CCGTGGCCGT TTGCTCCGAC GGTTCCTACG GCATTGAAAA AGGTCTTATC
TGCTCCTTCC CGGTCCGCAC CACCAAGGAT GGCGGCTGGG AAATCGTGCA GGGGCTGCCG
GTTGATGCGT TCTCCCGTGA AAAAATTGAC GCTACCGTTA ATGAACTGAA GGAAGAACGT
GACGCTGTTT CCTCTTTGTT GAAGCATTAA
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| Protein sequence | MKTPITVTVT GAAGQIAYSL LFRIASGSML GPDQPINLRL LEIPPAMNAL EGVVMELRDA
AFPLVNEIVP TSDPDEAFAG ANWCLLVGSV PRKAGMERKD LLDINGKVFI GQGQAIARSA
AKDVRVLVVG NPCNTNALIA MHNASGVPSD RFFAMTRLDE NRAKSQLAEK AGVHVTEVTN
MAIWGNHSST QYPDFTNARI GGKPVTEVIK DTEWLKGDFI TTVQQRGAAI IKARGASSAA
SAASAAVDTV RSLATQTPEG DWYSVAVCSD GSYGIEKGLI CSFPVRTTKD GGWEIVQGLP
VDAFSREKID ATVNELKEER DAVSSLLKH
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