| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1416 |
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| Symbol | |
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| ID | 6274608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 1694530 |
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| End bp | 1695192 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642613474 |
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| Product | Holliday junction DNA helicase RuvA |
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| Protein accession | YP_001878020 |
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| Protein GI | 187735908 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0632] Holliday junction resolvasome, DNA-binding subunit |
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| TIGRFAM ID | [TIGR00084] Holliday junction DNA helicase, RuvA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 0.685038 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGGAAG CGGTTCCGGA GGATGCGTTT TTAGCTTGCG CGCGGGCCGG ATTGTGTCAC
GTTAAGGGTA TGATAGCTTT TCTGCGCGGC ACGGTGGCGG AATCATATCC CCAGCGGTTG
ATCCTGGATG TTCATGGGGT GGGGTATGAA GTGATTGTGC CCCTGTCCAC GTTTGACAGG
CTGAATCCCC TTCCCGGCAG AGAGCTGACG CTGAAAACCT ACCTGCATGT CCGGGAGAAC
ATGCAGGTGC TGTACGGTTT TGCCACGGAT GCGGAAAGGG ATATTTTCCT GCTGCTGATT
GAACGTGTTT CCGGAATCGG CCCGGCAACG GCGATTGCCA TTTTGGGTTC CCTGTCCGTG
GAGCAGTTCA AGCAGGCGGT TGTGGGCGGA GATGTTTCCG GCATTGCTCG GGCCAAGGGG
GTGGGCAAGA AGACGGCGGA ACGCATCGTC CTGGAACTGA AGGATAAAGT GGGCCTGGCC
GCCACGTGGG AAGCCCAGGC CCAGGGCGCT ACTTCCCAGG CCGCCGGGGA CGCGGAATTG
GCGCTGATTG CGCTCGGGTT CAAGCAGGTG GAATCCCGCA AGGCGATAGC CGCCCATCTG
AAGGACCATC CGGATGCAGA CGTGGACGAG CTCATACGCG CCGCTTTGCG TTCCATGAAT
TGA
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| Protein sequence | MTEAVPEDAF LACARAGLCH VKGMIAFLRG TVAESYPQRL ILDVHGVGYE VIVPLSTFDR
LNPLPGRELT LKTYLHVREN MQVLYGFATD AERDIFLLLI ERVSGIGPAT AIAILGSLSV
EQFKQAVVGG DVSGIARAKG VGKKTAERIV LELKDKVGLA ATWEAQAQGA TSQAAGDAEL
ALIALGFKQV ESRKAIAAHL KDHPDADVDE LIRAALRSMN
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