Gene Amuc_1407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1407 
Symbol 
ID6275750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1682982 
End bp1683272 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content55% 
IMG OID642613463 
Productchaperonin Cpn10 
Protein accessionYP_001878011 
Protein GI187735899 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0234] Co-chaperonin GroES (HSP10) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value0.780371 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAACA TCAAACCCCT AGGACAACGT GTGCTGGTCA AGCGCATTGA AGCTGAAACC 
AAGACGGCCG GCGGCCTGTT CCTGCCGGAC ACCGCCAAGG AAAAACCCCA GGAAGCCGAA
GTGATCTCCG TAGGCACCGG CGGCCGCGAT GAAAAAGGCG CCCTGATTGA ATTTACCGTG
AAGCCCGGAG ACCGCGTGCT TATTTCCAAG TACGGCGGCA CGGAAATCAA ACTGGACGGG
GAAGACTACC TTATCCTGTC TGAAAACGAT ATTCTGGCCA TCATCGGCTA A
 
Protein sequence
MANIKPLGQR VLVKRIEAET KTAGGLFLPD TAKEKPQEAE VISVGTGGRD EKGALIEFTV 
KPGDRVLISK YGGTEIKLDG EDYLILSEND ILAIIG