| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1390 |
|---|
| Symbol | |
|---|
| ID | 6274602 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 1660025 |
|---|
| End bp | 1661212 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642613447 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001877995 |
|---|
| Protein GI | 187735883 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3274] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.67535 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 0.125851 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTGC CGCTGGCTGA TGATGAAGAG AAAGGAAAGC GTTTTTCCTG TGGTTGTCCG
GAATATATTT CCCCGTCCCG GAATTATGGA ATAGATGCCT TGCGCATTGT CGCCATGATG
ATGGTTTTAA TTCTTCATCT TTTGGCTTCC ATTGATGTTT TGTCTTTGGA GAACCATGGG
TCCGCTTCCT ATAATGTCGG GTGGCTGCTG GAGATTGCCG CTTATTGCGG TGTGAATTGT
TATGCGTTAA TTACAGGATA TGTGTGCTGC GACGGAACGT TCAGGTATGA ACGTGTGGTT
TCCTTATGGT TTCAGGTTGT TTTTTATACA TGGGGCAGTT TGCTGCTGGC TCTGTTGTTT
TTCCCCCAGG AGGTTCAGTT GAGTAATATT CTGCATTCCC TTTTTCCGGT TTTATCCGGC
CAATATTGGT ATGTGACGGC GTATGTGGGG CTGTTTTTCT TCATTCCGTT TCTTAACGCC
CTGGGGAACA GGCTGACCAA ATTACAGTTC CAGTATCTTC TGGTTACCGT TTTCATGCTG
TTTTCCATTA TTCCCACCCT GCTTCACACG GATGTGTTCC CGGTGGAAGA AGGGTATAGC
ATCTGGTGGC TGGGCATCCT TTACATGCTG GGGATGTATG TTAAAAAGCA TGGCTTGCTG
ACGGGAATGA AAACGCGTCC GTTATGGATG TTTTATGCCG GATGCGTATG TTTTGCCTGG
GTTTTCAAGA TGGTTCTGAA TGTGGTGTCT CCATACCTGA TTGGGCAGAT CAAGGGCGGT
GGAATGTTTA TTCGCTATAA TTCTCCTTTT ATTGTAGGGC CGGCGGTTGC CCTGTTGCTG
ATTTTTTCCC GGATGCATTT TTCATCCCGA AGGGCTGTCT CCTGTATTTC ATGGCTGGCG
GCAGCGTCGT TCAGCGTTTA TGTGCTGCAT TGTAATGCTT TGATAGGAAA ATGGTTTTTG
TGGGATGTCT TTGAGTGGAC AGCGTCTTCT TCCTCAGCCC TGATGGTTGT GAACGTGTTG
GCAATAGCCG CCGTGGTTTA TGCCGGATGC GCCTTGGTGG ACTCCGTGCG GCGTTATTTA
TTTAAGCTCA TGAACGTGGA AAGGGGCGCC CGGGCGGTGA CGGGCTTTTG CGGAAAGCTG
GGGCATGCGT TCCGGAAGAT GTGCCGCCGG ATAGATTCGC ATCCCTAA
|
|---|
| Protein sequence | MSLPLADDEE KGKRFSCGCP EYISPSRNYG IDALRIVAMM MVLILHLLAS IDVLSLENHG
SASYNVGWLL EIAAYCGVNC YALITGYVCC DGTFRYERVV SLWFQVVFYT WGSLLLALLF
FPQEVQLSNI LHSLFPVLSG QYWYVTAYVG LFFFIPFLNA LGNRLTKLQF QYLLVTVFML
FSIIPTLLHT DVFPVEEGYS IWWLGILYML GMYVKKHGLL TGMKTRPLWM FYAGCVCFAW
VFKMVLNVVS PYLIGQIKGG GMFIRYNSPF IVGPAVALLL IFSRMHFSSR RAVSCISWLA
AASFSVYVLH CNALIGKWFL WDVFEWTASS SSALMVVNVL AIAAVVYAGC ALVDSVRRYL
FKLMNVERGA RAVTGFCGKL GHAFRKMCRR IDSHP
|
|---|
| |