Gene Amuc_1376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1376 
Symbol 
ID6274487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1640200 
End bp1641009 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content53% 
IMG OID642613432 
Producthypothetical protein 
Protein accessionYP_001877981 
Protein GI187735869 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00857938 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00000000000221193 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCTAATA GAATCATCAG GGAAGGGTTT CTGACATCCG ACAAGGTCGA TAAGCTGAGT 
TGGGTGGAAG AGTGCTTCTA TCATCGTCTT TTACTTGCTG TAGATGACTA TGGACGGTAT
CACGCCGACC CTCCTCTACT GATCGGAAAG ATAATGCCTC GCAAAATAGG CAATGTCAGT
AACCAGGACA TAGAAAAGTG GCTCACCGCT TGTGTGACCG CGGGTCTTGT AAGGGTGTAC
GGTGTCGAAG GGAAGCGTTA TCTGGAGGTC TTGCAGTTCG ACCAAAGGAC CAGGGCGAAG
AAGAGTAAGT TTCCTGCCCC TGATGAAGAA AAAACTGACG CTTGTCAGTC AAATGACGGA
CATGTGTCAG ACATATGTCA GTCACGTGAC CGTCATCCGC TCGCCTATAC GGAGACGGAG
TCGAATACGA ATACGTATAC GAAATCGGAA ACGGAGACGG AGACGGAGAC GGAGACGAAG
GAAGCTGCGC CTGACGGCTC GCTTGCGGCT CCTTCTCGTT CTTCACTTCC TCTTCCTTCC
TCACCGGAAG AGGTGGAAGC CTACCTGAAA AACGAGGTAG CCAGATGCCG CTTGAAGCTG
CTCCCCAGGG ACGTTTCGGA ATGCGCCCTG CAATACTGGG CGGACCGGGG CGGCTCCGGC
TGGGTGGACA AGTTCTCCTG CCCCATTGCC GATTGGAAAG CCAATGCCCT GGGCTACGCC
CTGCGCTGGG CAAGAAATCT TGATGCCAAA GGGCAACTAC CCGGAGAGGA AAGCGACCCC
TTCGATCCAA AATTTAGAAA AAATATTTAA
 
Protein sequence
MPNRIIREGF LTSDKVDKLS WVEECFYHRL LLAVDDYGRY HADPPLLIGK IMPRKIGNVS 
NQDIEKWLTA CVTAGLVRVY GVEGKRYLEV LQFDQRTRAK KSKFPAPDEE KTDACQSNDG
HVSDICQSRD RHPLAYTETE SNTNTYTKSE TETETETETK EAAPDGSLAA PSRSSLPLPS
SPEEVEAYLK NEVARCRLKL LPRDVSECAL QYWADRGGSG WVDKFSCPIA DWKANALGYA
LRWARNLDAK GQLPGEESDP FDPKFRKNI