Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1376 |
Symbol | |
ID | 6274487 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 1640200 |
End bp | 1641009 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642613432 |
Product | hypothetical protein |
Protein accession | YP_001877981 |
Protein GI | 187735869 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00857938 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00000000000221193 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCTAATA GAATCATCAG GGAAGGGTTT CTGACATCCG ACAAGGTCGA TAAGCTGAGT TGGGTGGAAG AGTGCTTCTA TCATCGTCTT TTACTTGCTG TAGATGACTA TGGACGGTAT CACGCCGACC CTCCTCTACT GATCGGAAAG ATAATGCCTC GCAAAATAGG CAATGTCAGT AACCAGGACA TAGAAAAGTG GCTCACCGCT TGTGTGACCG CGGGTCTTGT AAGGGTGTAC GGTGTCGAAG GGAAGCGTTA TCTGGAGGTC TTGCAGTTCG ACCAAAGGAC CAGGGCGAAG AAGAGTAAGT TTCCTGCCCC TGATGAAGAA AAAACTGACG CTTGTCAGTC AAATGACGGA CATGTGTCAG ACATATGTCA GTCACGTGAC CGTCATCCGC TCGCCTATAC GGAGACGGAG TCGAATACGA ATACGTATAC GAAATCGGAA ACGGAGACGG AGACGGAGAC GGAGACGAAG GAAGCTGCGC CTGACGGCTC GCTTGCGGCT CCTTCTCGTT CTTCACTTCC TCTTCCTTCC TCACCGGAAG AGGTGGAAGC CTACCTGAAA AACGAGGTAG CCAGATGCCG CTTGAAGCTG CTCCCCAGGG ACGTTTCGGA ATGCGCCCTG CAATACTGGG CGGACCGGGG CGGCTCCGGC TGGGTGGACA AGTTCTCCTG CCCCATTGCC GATTGGAAAG CCAATGCCCT GGGCTACGCC CTGCGCTGGG CAAGAAATCT TGATGCCAAA GGGCAACTAC CCGGAGAGGA AAGCGACCCC TTCGATCCAA AATTTAGAAA AAATATTTAA
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Protein sequence | MPNRIIREGF LTSDKVDKLS WVEECFYHRL LLAVDDYGRY HADPPLLIGK IMPRKIGNVS NQDIEKWLTA CVTAGLVRVY GVEGKRYLEV LQFDQRTRAK KSKFPAPDEE KTDACQSNDG HVSDICQSRD RHPLAYTETE SNTNTYTKSE TETETETETK EAAPDGSLAA PSRSSLPLPS SPEEVEAYLK NEVARCRLKL LPRDVSECAL QYWADRGGSG WVDKFSCPIA DWKANALGYA LRWARNLDAK GQLPGEESDP FDPKFRKNI
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