Gene Amuc_1280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1280 
Symbol 
ID6274888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1542268 
End bp1543377 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content60% 
IMG OID642613337 
Productaminopeptidase 
Protein accessionYP_001877886 
Protein GI187735774 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2309] Leucyl aminopeptidase (aminopeptidase T) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones82 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGACC CCCGTTTTCA GGCCCTTGCA GCCCAGCTTG CAGGGTATTC CACAGCCCTG 
CGCCCCGGAG ACAGGGTTCT GCTGGAACTG ACGGATATTC CGGAGGAAAT GGGAATAGCC
CTCATCCGGG AGGCGAGGAA TGCGGGAGCA ATACCCTTTC TGCGCCTGAA CCAGTCCCGC
CTGAACCGGG AAATGCTCTC AGGAGCAACG GAAGAACAAT ACGGCATCAT CGGCCGCCAC
CGCCTGGCGG AAATGGAGGA CATGGACGCC TACATTGAAA TACGCGGCGG GGGGAACGCC
TTTGAACTGT CCTCCGTTCC ACAGGAAAAT ATGGCCGCCG CCATGAAAGC CCTGAACCCC
GTCTCCCAGC GGCGCATCCG CCATACGCGC TGGTGCGGGC TTCGCTGGCC GTCCGGGGGA
ATGGCCCAGC AGGCGGCCAT GAGCACGGAA GAGTTTGAGG ATTTCTATTT CCGCACCTGC
CTGATGGATT ACGCCGCCCT GCGTCCCGCC ATGCGAAAGC TGGCCGCCAT GATGGAAAAG
GCTGAATATG TGAAAATTAC CGGGCCGGGA ACGGACATTT CCTTTTCCAT CAAAGGGCTG
CCTGCCATCC CGTGCGCAGG GGAATGCAAT CTGCCCGACG GAGAAGTATT CACCGCCCCC
GTCATCGACA GCGCCAACGG CCACATTTCC TTCAATACGC CCAGCCTGTT CCAGGGAATC
CCCTTTGACA ACATCCGCCT GACGCTGAAA AACGGACTGG TCGTGCATGC GGAAGCGGGA
GATAAAACAG GGGAGCTCAA CGCCATTCTT GACACAGACC CCGGCGCGCG GAGGCTGGGA
GAATTCGCCT TCGGCGTCAA TCCGGCCATC ACACGCCCCA TGCGCAACAT CCTGTTTGAC
GAAAAAATTT CCGGCTCCTT CCACTTGACG CCGGGGCAGG CCTACCACGT GGCGGACAAC
GGCAACCAGT CCCGCATCCA CTGGGACATG GTATGCATCC AGACGGAAGC GGCCGGGGGC
GGAGATATTT ACCTGGACGG GAAGCTGGTG CGCCGCAACG GATTATTCAC CCTGCCGGAA
CTGGCCATTC TCAACCCCTC CCTATCATGA
 
Protein sequence
MRDPRFQALA AQLAGYSTAL RPGDRVLLEL TDIPEEMGIA LIREARNAGA IPFLRLNQSR 
LNREMLSGAT EEQYGIIGRH RLAEMEDMDA YIEIRGGGNA FELSSVPQEN MAAAMKALNP
VSQRRIRHTR WCGLRWPSGG MAQQAAMSTE EFEDFYFRTC LMDYAALRPA MRKLAAMMEK
AEYVKITGPG TDISFSIKGL PAIPCAGECN LPDGEVFTAP VIDSANGHIS FNTPSLFQGI
PFDNIRLTLK NGLVVHAEAG DKTGELNAIL DTDPGARRLG EFAFGVNPAI TRPMRNILFD
EKISGSFHLT PGQAYHVADN GNQSRIHWDM VCIQTEAAGG GDIYLDGKLV RRNGLFTLPE
LAILNPSLS