Gene Amuc_1270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1270 
Symbol 
ID6273814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1531134 
End bp1532057 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content59% 
IMG OID642613327 
Producthypothetical protein 
Protein accessionYP_001877876 
Protein GI187735764 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCCGC CCGCCAAGAT ATTCCTGCTG CTGATTTTTT CCTGGGCAGT TTTCCCCCGC 
CCTCTCCAGG CCCGGGAAGA GCCGCCCGCA TCCCCCTCCT GGCCGCGCTG TGTTCCTGCA
CGCCCCGGCA GCCGTATTCT CTTTCTGGGA AACAGCTATA CGTTTTTCAA CCGCATGCCC
GCCATGGTTA AAGCCATGGC AGACACCAAA GGATTGCGGC CGGACGTGCA CATGCACGCG
GCTCCGGCAG CATCCCTCCA GTCCCATTGG AATGACAGGC GTGCCCGCAG CAACATGGAG
GGAACGGCAT GGGACTTCGT TATTCTCCAG GACCAAAGCG CCACACCTAT CCGGGCTCCG
GAACGAACCA TGGAGTTCGG AGAAAAATGG TGCTCTCTGA TACGAGCCGC CAAAGGAACG
CCCATCCTGA TGCTGACGTG GGGGAAAAGA GGAGCTTCCG GAACTCCGGA CCCGCAGGAG
CAAAAGGATC TTCTTGAAAC GTATTTGAAA CTTGCCCGGA GGGAAAAAGC AGCGCTCGCC
CCCGTGGGCA TTGCCTGGGA GAATTGCCTC AAACGCCATA CTGACATCCA GCTGTACCAG
ACTGACGGCC GGCACCCGAC GGAGGAAGGG AGCTACCTGA CGGCATGCGT AATCTACTTC
ACGTTATTCG GAAAGTCTCC GCTGGGCCTG CCGGGCCGCT TGTCCTTGAA AGGGACGCGG
CTGAGCAATC TTCCCGCAGA CAGGGCCAGA ATATTGCAGA CCGTCGCCAG GGATACATGC
AGGCAGCTCT TTTCCGCCAC TGCCGGAACC CGTCCCGCAA CCGCCGGATT GCAGGCCGCT
GCATTGTCTC CGCATAGCGC AAAATCTACT CGCAAAACGG GCACGGGCCC TTTACCATGG
CAACGGACAT ATATACTATT ATGA
 
Protein sequence
MMPPAKIFLL LIFSWAVFPR PLQAREEPPA SPSWPRCVPA RPGSRILFLG NSYTFFNRMP 
AMVKAMADTK GLRPDVHMHA APAASLQSHW NDRRARSNME GTAWDFVILQ DQSATPIRAP
ERTMEFGEKW CSLIRAAKGT PILMLTWGKR GASGTPDPQE QKDLLETYLK LARREKAALA
PVGIAWENCL KRHTDIQLYQ TDGRHPTEEG SYLTACVIYF TLFGKSPLGL PGRLSLKGTR
LSNLPADRAR ILQTVARDTC RQLFSATAGT RPATAGLQAA ALSPHSAKST RKTGTGPLPW
QRTYILL