Gene Amuc_1246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1246 
Symbol 
ID6275402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1495432 
End bp1496679 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content55% 
IMG OID642613303 
Producthypothetical protein 
Protein accessionYP_001877852 
Protein GI187735740 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTTC ATATAGAACC CACGGAAGAC GCAGTGGAAA CCCTGCGCAA GGAAAGGCGG 
AAAAATTATA TTGCCGCATT AGCGACATCC ATTCTCTCCG TCGTTTTGGC AGGAGCCATT
CTCTACTCCC TGACCATCAT CATCGCCCCT CCGGAAGAAC CCAAAGTCGT CGGCTACATC
ACGCCGGACG ATGCGCCGCC GTCGGATACG CCTCCGCCGC CGGAAGTACA GAGGGAAACT
TCCTCTTCCT CCCATGCGGA GACGCCCGTC AAGGTCGTGG TGGCAGCGGC CGCCGCTCCG
GTGAGCCTCC CCAAGATCGA CATTGACCCG CCCGATGAAC CTGTCATGCT GGAGGAGGGA
ACCGCCCTCG GCATGGGGGA CGGCTTCGGC CCCGACCTGG GAGACGCTAC CTCCGCCTTT
GGTACGTCCA AACCCTCCGG AAGCACGCTG GTAGGTACCT TTTACGACAC CAAGCAGACT
CCTGGCGGAC GTCCTACCAA CATGAACATG AACCAGTACA GGGAGTTCCT TTCCCGCTTC
GTGAACAAAG GCTGGAACGA ATCGGAACTG AACCGTTTTT ACAAGGCTCC GCAACAATTA
TACGCAGCCC AGTTCTACAT ACCTAGGACT CCCGCCAAAG ACGCTCCCAA GGCCTACGGT
TGCGATGACA AAGTAAAGCC TAGCCAGTGG CTCGCCATTT ACCGGGGAAA AGTACGCGCC
CCCAAGTCCG GCACGTTCCG ATTCGTGGGG TTGGGAGACG ACTACTTAGT AGTACGGTTC
AATAAACAGA ATGTCTTCGA CTACGGCTGG GAATCCGCTT CTCTGGGGAA AATGACGGCA
AACAACGCCA AATGGCTTGA TGCCATGGAA GGCAAACCCG GCAATGACGA CTTGAAAAAG
GAACTCCGGG AAGTGGGCAT CAATGTCCCC CCCGTTACGT TCTACAAATA CAGTTCTTCC
GGGCACTGGA ACAACACTAT GCGCGGTGTG GCAGCCGGCA AGCAGTTCAC GGTGGAACAG
GGCAAGGTTT ACCCCATTGA AATCCTAGTT AGTGAAGGTC CTGGTGGCGA ATTCGGCATG
ACTCTTCTGC TTGAAGAAGT TGGAATGGCC CCCATGAGCA AGGATCCTAA AACGGGAGCT
CCCATCCTGC CCCTGTTCCG AACCAACTAC GGCGTTCCGA AACCGGACAA GAACAAGGAA
CACGTGCCAT TTGACGAAAT CGGCATTGTC TGGGAATCCA TCAAATAA
 
Protein sequence
MSLHIEPTED AVETLRKERR KNYIAALATS ILSVVLAGAI LYSLTIIIAP PEEPKVVGYI 
TPDDAPPSDT PPPPEVQRET SSSSHAETPV KVVVAAAAAP VSLPKIDIDP PDEPVMLEEG
TALGMGDGFG PDLGDATSAF GTSKPSGSTL VGTFYDTKQT PGGRPTNMNM NQYREFLSRF
VNKGWNESEL NRFYKAPQQL YAAQFYIPRT PAKDAPKAYG CDDKVKPSQW LAIYRGKVRA
PKSGTFRFVG LGDDYLVVRF NKQNVFDYGW ESASLGKMTA NNAKWLDAME GKPGNDDLKK
ELREVGINVP PVTFYKYSSS GHWNNTMRGV AAGKQFTVEQ GKVYPIEILV SEGPGGEFGM
TLLLEEVGMA PMSKDPKTGA PILPLFRTNY GVPKPDKNKE HVPFDEIGIV WESIK