| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1237 |
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| Symbol | |
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| ID | 6275845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 1484750 |
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| End bp | 1486246 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642613294 |
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| Product | excinuclease ABC C subunit domain protein |
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| Protein accession | YP_001877843 |
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| Protein GI | 187735731 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
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| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.173931 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.435946 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGACG CCCGGGGAAA TACCATCTAC GTGGGCAAAG CCAAGGACCT TCACCGCCGC
CTGGGCAACT ATTTTTCTCC CACGGGAGCC ACACTCTCCA ATCATAAGAC AAGAGCGCTC
ATTAACGCTA TTGCGTCATT TGATTATTTT GAAACCAGAA ATGACCAGGA GGCTTTTCTG
CTGGAAAGCA AACTGATTAA ACAATATCGT CCGCATTACA ATATCCAGAT GAAGGACGAC
AAGCGCTACC CCCTGCTGAA AATTCCGAAG GGGGAAAAAC TGCCTCGTTT CCAGCTGGCG
CGAGTGCGCA AAGATGACGG AGCGCGCTAC TTCGGCCCCT TTGTCCACTC CCAGGCTCTT
TACGCCACGC AGGAATGGCT TAACCGGCAT TTCCGGCTGC GAACCTGCAA GACAAAAAAT
CCGGGAATTC ATGACTTCAG GCACTGCCAT GCGGATGTGA TTCGCAACTG CTCCGCTCCG
TGCATTGGCC GCATTTCCAT CAATGATTAC AACCGGAACT TTGACCAGGC GGTGCGTCTG
CTGGAAGGAA CGGGAAGAAA AAGCACTCTG GACGAACTTA CCGGGGAAAT GATGGAAGCC
GCCGATAAAC TGGACTTTGA ACGTGCGGCA TACCTGCGGG ACATCCGGGA CAATCTGGTC
AAGGTACTGG AACCCGCCCG GCGGTTCCGA AAAAGAACTC CCGATCTTCC CGGCACCGTT
CATCCGGAAG AAGACATGAA GGAACTGGGG GTGGCCCTGG GATTAGAATC TCCCCCAACC
ATCATGGAAT GCTTTGACAT TTCCAATGTC TCTTCCAACC ATATCGTAGC CTCCATGGTG
CGCTTTACCA ACGGCAGGCC GGATAACAAA GCCTACCGTC GGTACCGTAT ACGTACTGTG
GACGGACAAA ATGACTTCGC CTCCATGTCG GAAGTCATCC GGAGGCGTTA CTCCCGCATT
CTGGCGGAGA GCGACGCCGT AGCCTCACGG CAGGCGGACA TGACCCTGTA CCAGTGGCTT
AAGAAACTCA GCGCGGAAGG AAAAGCCCCC ATCAAAGTTC CAGATCTGGT AGTCGTGGAC
GGAGGTAAAG GACAGCTTTC CTCCGCTCTG GCCGATTTGG AAGCCATCGG CCTGGGAGAC
ATGCCCATCG TAGGCCTGGC CAAGCAGAGG GAAGAAATAT TTTTTCCCCA CCAGTCCCAG
CCCCTTTGCC TGCCTCACAG CACGGGAGCC CTCAAACTCA TGCAGCGCAT CCGCGACGAA
GCCCACCGTT TCGCCAACGG CTATAACGAA CTGCTCTACC GCAAACGCAT GCGGGAAAGC
GCCTTGGACG ACGCCCCGGG CATGAGCGCC TCAAAAAAAA GACTGTTGCT GGAAAAATTC
AAATCCGTAA CTGCCATTAA AAAGGCGGAC CCGGCTTCTA TCGCCGCCAT CCGCGGCATT
TCGGAAACTT GGGCCCGCAC CCTGCTGAAC TACCTTAACT CATCTTCCAA CTCCTGA
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| Protein sequence | MKDARGNTIY VGKAKDLHRR LGNYFSPTGA TLSNHKTRAL INAIASFDYF ETRNDQEAFL
LESKLIKQYR PHYNIQMKDD KRYPLLKIPK GEKLPRFQLA RVRKDDGARY FGPFVHSQAL
YATQEWLNRH FRLRTCKTKN PGIHDFRHCH ADVIRNCSAP CIGRISINDY NRNFDQAVRL
LEGTGRKSTL DELTGEMMEA ADKLDFERAA YLRDIRDNLV KVLEPARRFR KRTPDLPGTV
HPEEDMKELG VALGLESPPT IMECFDISNV SSNHIVASMV RFTNGRPDNK AYRRYRIRTV
DGQNDFASMS EVIRRRYSRI LAESDAVASR QADMTLYQWL KKLSAEGKAP IKVPDLVVVD
GGKGQLSSAL ADLEAIGLGD MPIVGLAKQR EEIFFPHQSQ PLCLPHSTGA LKLMQRIRDE
AHRFANGYNE LLYRKRMRES ALDDAPGMSA SKKRLLLEKF KSVTAIKKAD PASIAAIRGI
SETWARTLLN YLNSSSNS
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