| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1236 |
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| Symbol | |
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| ID | 6274707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 1484306 |
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| End bp | 1484743 |
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| Gene Length | 438 bp |
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| Protein Length | 145 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642613293 |
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| Product | protein of unknown function DUF163 |
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| Protein accession | YP_001877842 |
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| Protein GI | 187735730 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1576] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0319909 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.195697 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAATTCC TGATTCTGGC CGCCGGAAAG CCTTCCCTAG GCTACGCCAA GGAAGGCGTG
GAACTCTATC TCAACCGCCT CAGGCCCTTC GGCAAGACGG AACTCAAGCT TGTCAGGGAC
GGAAGCTCCC AAGACGTTTC TAAACGTCTG CTGGCCGCCA GCGAGGGTTG CCTGCGCATC
GCCATGGACG AACGCGGAGA ACTTTGGACC ACAAGAAAGC TAGTCGACCT GGCAAAGGAC
TGGCAAATGC ATTCCGTACG CCGCATCGCG TTTCTCATCG GAGCCTCAGA CGGTCATACG
GAAGAACTGC GGTCCCGGTG CAACCATATC CTGTCCTTGA GCAAATTCAC CCTTCAACAT
GAACTGGCGC TTGTTGTCCT GCTGGAACAG CTTTACCGCT GCCACACTAT CCTGGCAGGA
ACACCATACC ATCGGTAA
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| Protein sequence | MQFLILAAGK PSLGYAKEGV ELYLNRLRPF GKTELKLVRD GSSQDVSKRL LAASEGCLRI
AMDERGELWT TRKLVDLAKD WQMHSVRRIA FLIGASDGHT EELRSRCNHI LSLSKFTLQH
ELALVVLLEQ LYRCHTILAG TPYHR
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