Gene Amuc_1141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1141 
Symbol 
ID6273898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1363174 
End bp1363959 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content62% 
IMG OID642613193 
Productglycosyl transferase family 11 
Protein accessionYP_001877748 
Protein GI187735636 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.565548 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.0912925 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATGG AACGGAAAAC CGGCCTTATG AATAAAAAAT ATGTTTCCCC GTGTTTCCTG 
CCCGGCATGC GGCTGGGCAA CATCATGTTC ACGCTGGCGG CCGCCTGTGC CCACGCCCGT
ACCGTAGGGG TGGAGTGCCG GGTGCCCTGG GCTTACAATG ACGCTTCCCT GATGCTGCGC
TCCCGGCTCG GCGGCTGGGT GCTCCCTTCT ACGCCGTGCG GCACCAATGA ACCTCCATCC
TGGCAGGAAC CTTCCTTTGC CTATTGTCCG GTTCCCTCCC GCATCCGGAC GGGCGGGCTT
CGCGGCTACT TCCAGAGCGC ACGGTATTTT GAAGGGCAGG AAGCGTTCAT CCGGGCGCTT
TTCGCGCCTC TCACCGCGGA GAAGGAGCCC GGCGCCGTTG GCATTCACAT CCGGCTTGGG
GACTACAGGC GCCTCCGTGA CAAGCACCGC ATTCTGGACC CTGGTTTCCT GCGGAGGGCC
GCAGGGCATT TATCATCCGG GAAGAACCGT CTGGTGCTGT TCAGCGATGA GCCGGACGAG
GCGGCGGAGA TGCTTGCGCG CGTGCCGGCA TTCGGACGCT TTGCGCTGGA AATCGACCGC
GGCGCTCCGT GCGAATCCCT CCGCCGCATG ACGGCGATGG AGGAACTCGT CATGTCGTGT
TCTTCCTTTT CCTGGTGGGG CGCGTGGCTG GGAAATACCC GGAAGGTCAT CGTTCCGCGC
GACTGGTTTG TCGGCGGTGT GGAAGACTAC CGGGATATTT ACCTGCCCCA TTGGGTAACA
CTGTAA
 
Protein sequence
MNMERKTGLM NKKYVSPCFL PGMRLGNIMF TLAAACAHAR TVGVECRVPW AYNDASLMLR 
SRLGGWVLPS TPCGTNEPPS WQEPSFAYCP VPSRIRTGGL RGYFQSARYF EGQEAFIRAL
FAPLTAEKEP GAVGIHIRLG DYRRLRDKHR ILDPGFLRRA AGHLSSGKNR LVLFSDEPDE
AAEMLARVPA FGRFALEIDR GAPCESLRRM TAMEELVMSC SSFSWWGAWL GNTRKVIVPR
DWFVGGVEDY RDIYLPHWVT L