Gene Amuc_1073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1073 
Symbol 
ID6274035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1281418 
End bp1282308 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content52% 
IMG OID642613124 
Producthypothetical protein 
Protein accessionYP_001877680 
Protein GI187735568 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.00441998 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTATCC GTTATTGTTC TTTCGCGACC CGCGGCTATC ATTTGCGGCA ATGGATGCAG 
ATGATGAGCC TGAGGCTGGC GGATTCCTCA GTGGAGTTGT CCTGTTGGAA TCTTAATCGC
CTGGAAAGGG AAGGAATCAG GGAGGCTATT CCATGGTTTG ACCTGAATTT ACAGGGTGTC
GGGTTTTGGG TATGGAAACC CTTCATCATT CTCAAGGAGC TGGAACATTT GGAGGAAGGG
GATTACCTGC TTTATACGGA TGCGGGGCGC CCGCCGGGGA GGCTTTTCCA TCATTCCTTG
GAGCCGTTTG TCCAATGGCT CCGGGAGAAG GGGCAGGATA TGATGCCGGG CGTGAATATT
TCCTATTATA CGGGAGGCCT TACGCGGTGG TGCAAGCAGA GCGTTTTTGA TGAATTGAAG
CTGGATAGCG GGTCTTTTGA ACAGGCTCCC CTGATTCAGG GCTCCTTCCT TTTCTTGAAA
AAATCGGAAC AAAGCCTCCG AATTCTCCGT GAATGGATGG ATTTGTGCCG TCAGTTCAAA
TTGGTGTCTT CTGCCACTAC GGAAGAAGAG AGCCGTTGCC GCGATAATTT TGTAGCTCAT
ACGCACGATC AGACGCTGCT GTCTCTCGTG GCGGCGCAAC ATCATCTGGA CTGCCTGTAT
TCCGGGAAGG GCGTCATTCA TCTGGAAGGC CGCCGGGCGT TTGAGCGGCA TCCCGGTTTT
GACGACAAAG ACCCGGACTG GTTTTTGGAA GAGCTTGGCG CAAAGAAAGC GGAGCATCCC
TTAATGCCCG TGCTTTGCTG CATGCAACAG GCGTTTTTCC TGTATGAAAA AGCCATGAAT
AAATTGATGA AGCTGGCGGG CTTGAGACCC CTCCGCGGGT TTTACGGTTG A
 
Protein sequence
MAIRYCSFAT RGYHLRQWMQ MMSLRLADSS VELSCWNLNR LEREGIREAI PWFDLNLQGV 
GFWVWKPFII LKELEHLEEG DYLLYTDAGR PPGRLFHHSL EPFVQWLREK GQDMMPGVNI
SYYTGGLTRW CKQSVFDELK LDSGSFEQAP LIQGSFLFLK KSEQSLRILR EWMDLCRQFK
LVSSATTEEE SRCRDNFVAH THDQTLLSLV AAQHHLDCLY SGKGVIHLEG RRAFERHPGF
DDKDPDWFLE ELGAKKAEHP LMPVLCCMQQ AFFLYEKAMN KLMKLAGLRP LRGFYG