| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1052 |
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| Symbol | |
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| ID | 6274058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 1254796 |
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| End bp | 1256106 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642613103 |
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| Product | trigger factor |
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| Protein accession | YP_001877659 |
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| Protein GI | 187735547 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
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| TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.271943 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATCA ACGTTGATAT TCAACCGGAC TGCACAGCCA CGCTGAAAGC TTCCATCCCT
GCAGAAACCA CGGCTGCGCG CCGCGCCTCC ATTGTAGATT CCTATGCCGC CAAAGCCAAG
CTTCCCGGCT TCCGCCCCGG CAAAACACCC AAGTCCATCA TTGAAAAGCG CTTCAAGAAA
GAAATGGAAG AAGAACTGCT GGACACCCTT TTTGAAACGG CCTGCTCCAC CGCTCTGGAA
GAAAACCCCA AATTGAAAGT GCTCAGCTTC GGAAAGCCGG AACAATCTCT GGATGACCAG
GGCAACTACA CCGCTACCAG CACGATGACC GTGGTTCCCG AATTTGAATT GCCGGAATAC
AAAGGCATCG AAGTCAAGGT TCCCTCTTCC GAAGTAACGG AAGCAGACGT AGAGGAAGCT
CTGAACTCCC TGGCTGAACA AATCGCGGAA TTCACCCCTG TGGACCGCGC CGCCCAAAAA
GACGACGTGG CGATTATCGA CTTCAAAACC ACGTTGGACG GCAAGCCCGT AGCGGAAGCC
GTAGGCAAAC CCGTAGGCTT CCTGGAAGGC CGTGACGGCC AGTGGATGAA GGTGGAAGAC
GATCAATTCC TGCCCGGCTT CGCCTCCGCC CTGGAAGGCC TGAATGCCGG TGACAGCAAG
GATATCACCG TCACCATTCC GGATACCTTC CCAATTACGG AACTGCGCGG CAAGGAACTC
GTATTCCATG CCACTGTGAA AGAAGTACGG GAAAAACAGC TTCCGGCCAT GGATGATGCT
TTTGCGGAAA AAGTTCTTCC CGGCAAAAAC CTGGAAGAAT TGAAAACCGC CCTGAAGGAA
AACCTGGCCC AGCGCAAAGC CATGCAAATT GATGAGGCCA AGGCCGATCA GATCACGGAA
AAGCTGGCGG ACATGCTTGA CTTCAACCTT CCGGAAGCCG TCGTAGAACG TGAAGTGTAC
GGCATCCTCC AGCAGAAAAT GCAGCAGGCC ATGTACAGCG GAAACGCCCC GGCGGACATG
GATAAGTTTG TGGAGGAAGC CCGGGAAGAA GCCAAACAGG AGGCCAAGCG CAACCTTAAG
GTCTTCTTCA TGCTTCAGGA AGTGGCGCAG GTGGAAAAAA TTGCCGTCAC GGAAATGGAG
CTTTACAACG AAGTGGCCCG CCAGGCCCGC CAGCAGAAAA AGAACCTCAA ATCCTACATT
CGCGAACTCC AGCGCGAAGG CCGCGTGCAT GGCATCAGAA TGAGCCTGCT GACAGCCAAG
GTTCTGGACT TCCTGACAAA AGAGGCCAAA GTAACGGTAG ACGAGCAGTA A
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| Protein sequence | MEINVDIQPD CTATLKASIP AETTAARRAS IVDSYAAKAK LPGFRPGKTP KSIIEKRFKK
EMEEELLDTL FETACSTALE ENPKLKVLSF GKPEQSLDDQ GNYTATSTMT VVPEFELPEY
KGIEVKVPSS EVTEADVEEA LNSLAEQIAE FTPVDRAAQK DDVAIIDFKT TLDGKPVAEA
VGKPVGFLEG RDGQWMKVED DQFLPGFASA LEGLNAGDSK DITVTIPDTF PITELRGKEL
VFHATVKEVR EKQLPAMDDA FAEKVLPGKN LEELKTALKE NLAQRKAMQI DEAKADQITE
KLADMLDFNL PEAVVEREVY GILQQKMQQA MYSGNAPADM DKFVEEAREE AKQEAKRNLK
VFFMLQEVAQ VEKIAVTEME LYNEVARQAR QQKKNLKSYI RELQREGRVH GIRMSLLTAK
VLDFLTKEAK VTVDEQ
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