| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1050 |
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| Symbol | |
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| ID | 6274060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 1252607 |
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| End bp | 1253977 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642613101 |
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| Product | ATP-dependent Clp protease, ATP-binding subunit ClpX |
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| Protein accession | YP_001877657 |
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| Protein GI | 187735545 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0052122 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGGTT CCACCCCTCA TCTTCCTGCC TGTTCCTGCT GCGGCAAGCC CGGGAACAAG
GTGGACAAAC TCATCCAGAT TGCGGAAGAC TTTTACATCT GCAACAATTG CGTTGAAATT
TGCGTCAACA TGATTGTGAA GGACACAGGC CTTCCGATGG CGACCCGCTT CATCCGCGGC
ATCCTGAACA TGGAACCCTC CGCTTACGCC ATGTGCCAGG CGGAGGCCCG CAAAGCGGCA
GCCGCGGACA TGCTCAGGGA AACGGCGGCC GGCCCGGCCT CCTATGAAGG CCCGCTGCCC
ACACCGGAAG AAATGTGCGC TACGCTCAAC CAGTATGTCA TCGGTCAGGA CTACGCCAAA
AAAGTGCTTT CCGTAGCCGT GTACAACCAC TACATGCGCC TGCGCCAAAG TGCTGTCATG
CTGGACGACA AGTCCCTGGA CGATGTGGAA ATTGAAAAAT CCAACATCCT GCTGGCCGGC
CCCACCGGCT CAGGAAAAAC CCTGCTGGCG AAAACGCTGG CGAAAATGCT CAACGTCCCA
TTCTGCATTG TGGACGCCAC CACGCTGACG GAAGCCGGTT ACGTAGGGGA AGATGTGGAA
AACATCATCC TGCGCCTGCT CCAGGCTGCC AACTTTGACG TAGCGAAAGC GGAACAAGGC
ATCATCTACG TGGATGAAAT CGACAAAATC GGACGCAAAA CACAGAATGT CTCCGTCACG
AGAGACGTCT CCGGGGAAGG CGTGCAGCAG GCTCTGCTGA AAATCATTGA AGGCACCATC
TGCAATGTTC CTCCCACCGG AGGCCGCAAG CACCCGCAAC AGGAATACAT CCGCGTCAAT
ACGGAAAAAA TCCTCTTCAT TGTGGGCGGC GCTTTCGTCG GGCTGGAAGA CATCATCCGC
AAACGCCTCG GCGCCACCCA GATGGGATTC GGAGCCATCA CGGAACAACG CGACCGCAAG
GAATACTCGG AAGAGGAAAT ACTGGCACAG GCCATGCCGG AAGACCTCTT CTCCTTCGGC
ATGATTCCGG AATTCGTGGG ACGCCTGCCC ATCTTCTGTC CGCTCTCCAA GCTGGATGAA
AGCCAGCTCG TCCGCCTTCT TACGGAACCC AAAAACGCCC TGGTCAAGCA ATATTCCAAA
CTGCTCGCCA TGTACGGCGC CAAACTGGAC GTGCTGCCGG ACGCCCTGAA AGCCATGGCC
GCCGAAGCCA TGAAACGCGG CACGGGAGCC CGCGCTCTGC GTTCCATCTT TGAAACCCTC
ATGCTGGACG TCATGTACAA AGTGCCCAGC ATGAAAAATG CGGACACCGT TACCATTACC
AGGGAAACGG TTACCGGCAA CAAGCCGGCC CAAATCCACC AGTCCTCCTA A
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| Protein sequence | MSGSTPHLPA CSCCGKPGNK VDKLIQIAED FYICNNCVEI CVNMIVKDTG LPMATRFIRG
ILNMEPSAYA MCQAEARKAA AADMLRETAA GPASYEGPLP TPEEMCATLN QYVIGQDYAK
KVLSVAVYNH YMRLRQSAVM LDDKSLDDVE IEKSNILLAG PTGSGKTLLA KTLAKMLNVP
FCIVDATTLT EAGYVGEDVE NIILRLLQAA NFDVAKAEQG IIYVDEIDKI GRKTQNVSVT
RDVSGEGVQQ ALLKIIEGTI CNVPPTGGRK HPQQEYIRVN TEKILFIVGG AFVGLEDIIR
KRLGATQMGF GAITEQRDRK EYSEEEILAQ AMPEDLFSFG MIPEFVGRLP IFCPLSKLDE
SQLVRLLTEP KNALVKQYSK LLAMYGAKLD VLPDALKAMA AEAMKRGTGA RALRSIFETL
MLDVMYKVPS MKNADTVTIT RETVTGNKPA QIHQSS
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