| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1010 |
|---|
| Symbol | |
|---|
| ID | 6274108 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 1206019 |
|---|
| End bp | 1206504 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642613059 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_001877617 |
|---|
| Protein GI | 187735505 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 64 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTTC AATTTATTAA AGTCACTAAA AAAGATAGGG TCTGCTATGC TCCGGTGCCG
GAGCCGTTGG AAGAGGGGGA TAAGCTGGAA ATCATGGAAA TGAAGGATGA AGCCCTTTTC
CCGCCGGCAG GGAAAAACGC AAGGATTTCC CTATCCAGGA ATCCCATGGT ATTCGTGAAA
ATGAATGACG GATTCCAGCG CATCCTGATG AAGAATATCC TGTATGTGGA GGCGGGCGGA
AGTTATTGCA CGCTGCACGT GCACGGCATG CCGGCTATCC TGGTATCCGC TCCGCTGGCG
CGGGTATCCG AGCATCTGGA TGGGGAATAT TTTATCCGCG TGCACCGTTC CTACCTGGTT
AACAAGCTGC ATATAGAATC CATTGCGGGC AACTTCCTCC AGGTGGGCGT CGTTGCCATT
CCCATCAGCA AATTCATGAA GAAAAAAGTG CTGGGCAGTT TGAACATGCT GTCGTTTTCC
AAATAA
|
|---|
| Protein sequence | MTVQFIKVTK KDRVCYAPVP EPLEEGDKLE IMEMKDEALF PPAGKNARIS LSRNPMVFVK
MNDGFQRILM KNILYVEAGG SYCTLHVHGM PAILVSAPLA RVSEHLDGEY FIRVHRSYLV
NKLHIESIAG NFLQVGVVAI PISKFMKKKV LGSLNMLSFS K
|
|---|
| |