| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0988 |
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| Symbol | |
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| ID | 6274139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 1181611 |
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| End bp | 1182426 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642613039 |
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| Product | TatD-related deoxyribonuclease |
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| Protein accession | YP_001877598 |
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| Protein GI | 187735486 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1099] Predicted metal-dependent hydrolases with the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 0.981061 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGCTT TCATAGAACC TCATATACAT ATGGTGTGCC GCACCACGGA CGAATACCGG
GCCATGGCGC AGGCCGGCTG CCTGGCGGTA GGGGAACCGG CGTTCTGGGC CGGTTACGAC
CGTTCGTCCG CGGACGGTTT CCGGGATTAT TTCGTACAGC TTACGGAATG CGAACCCGCC
AGGGCGGCCA AGTTCGGCAT GGACCATTAC ACATGGCTGT GCATCAATCC CAAGGAGGCG
CAGGACGTGG CTTTCGCGCG GGATGTGATG AAACTGATTC CGGAGTTCAT TGACCGGCCC
AATGTCCTCG GCATCGGGGA AATAGGGCTG AACCGGAATA CTTCCCATGA AATGACTATT
TTTGAAGAGC ATCTGGATCT GGCGGTGCGC CTCAACCAGC TTGTGCTGAT TCACACTCCC
CATCTGGAAG ACAAGCTTAA GGGGACCGTA ATGATTCTTT CCGCCCTGAA AAACCGTCCG
GATCTGGACC CTTGCCGCGT GCTGGTGGAT CACTGTGAGG AACATACCTT CCCGCTGGTG
AAGGAGGCCG GTTACTGGGC CGGGCTGACC CTTTATCCCA CCAGTAAGCT GAATCCCAAG
CGGGCGGGGG ATATTCTGGA ATTGTACGGA ATGGACCGTG TCTGGGCCAA TTCCGCGGCG
GACTGGGGGG ATTCCGATCC CCTGGCGCTG ACGGCCCTGG CCTGCGAGCT GCGCAGGCGC
GGTTTTTCCC GGCAGGAAAC GGAACGTCTT CTCCTGGAAA ATCCGGAGAC ATTCATGGGA
CAGTCCCCGA AGTTCCGGAA AGTGTCGTCC CGCTAA
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| Protein sequence | MMAFIEPHIH MVCRTTDEYR AMAQAGCLAV GEPAFWAGYD RSSADGFRDY FVQLTECEPA
RAAKFGMDHY TWLCINPKEA QDVAFARDVM KLIPEFIDRP NVLGIGEIGL NRNTSHEMTI
FEEHLDLAVR LNQLVLIHTP HLEDKLKGTV MILSALKNRP DLDPCRVLVD HCEEHTFPLV
KEAGYWAGLT LYPTSKLNPK RAGDILELYG MDRVWANSAA DWGDSDPLAL TALACELRRR
GFSRQETERL LLENPETFMG QSPKFRKVSS R
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