| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0974 |
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| Symbol | |
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| ID | 6274172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 1164679 |
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| End bp | 1165407 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642613028 |
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| Product | putative transcriptional acitvator, Baf family |
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| Protein accession | YP_001877587 |
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| Protein GI | 187735475 |
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| COG category | [K] Transcription |
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| COG ID | [COG1521] Putative transcriptional regulator, homolog of Bvg accessory factor |
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| TIGRFAM ID | [TIGR00671] pantothenate kinase, type III |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.158995 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.397357 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCTATC TTCTGATTGA CAATTCCAAC ACACGCACCA AATTCGTGCT CTCTTCGCCG
GAAGCCCTGT TGCCGGAACG GTATATGGTT CCCACCCGGG AGGTGAGCGG GGAACGGCTG
GACGAGGTGC TGGCCGGCGT TCGTTATGAT GCCGCCGTGG TGTGTTCCGT CGTGCCGCGC
GTGGCGGAAG AACTGAAAAA CTGGATCGTC AAACCGTGCC ATTTCCTTTC CTGCGATTCC
CGGCTGGGCG TGGGCATCGA CTATCCCCAC CCGCGCCAGA TAGGGGCCGA CAGGCTGGCG
AATGCCGTAG GAGCCGCGGC CTATTACGGG TATCCTTGCG TTGTGGTGGA CTTTGGCACC
GCCGTGACTT TTGACGTGAT CGGGCCCCAA TGCACCTACA TGGGCGGCGT TATTGCGCCG
GGGCTTGCCA GCATGGGGGA TTACCTGGAG CGCAATACGG CGCTTCTTCC CGCCATTGAC
CCCCAGGAGC CGTCCCGTGT CATTGGAACT AGCACAGTAG AGGCCATGCA ATCCGGCGCC
GTGTACGGTT ATCGGGGGCT GGTGAAGGAA ATTCTGGCCC GGCTGGAAGG TGAGCTGGGC
GTGCGTCCGG CCGTGGTTGC TACGGGAGGG GATGCAGCTC TGATCGCCAG GGGAGTGGAG
CGCATTGACC ATGTGGACCC TGACATTACG TTGAACGGCT TGCGCATAGC CGCCGGACTG
AATCTTTAA
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| Protein sequence | MTYLLIDNSN TRTKFVLSSP EALLPERYMV PTREVSGERL DEVLAGVRYD AAVVCSVVPR
VAEELKNWIV KPCHFLSCDS RLGVGIDYPH PRQIGADRLA NAVGAAAYYG YPCVVVDFGT
AVTFDVIGPQ CTYMGGVIAP GLASMGDYLE RNTALLPAID PQEPSRVIGT STVEAMQSGA
VYGYRGLVKE ILARLEGELG VRPAVVATGG DAALIARGVE RIDHVDPDIT LNGLRIAAGL
NL
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