| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0956 |
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| Symbol | |
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| ID | 6274207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 1139940 |
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| End bp | 1141991 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642613010 |
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| Product | translation initiation factor IF-2 |
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| Protein accession | YP_001877569 |
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| Protein GI | 187735457 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTAATA AACAAGAAGA GAAAGAACCC AAAAAGGAAG TATTGGATCT GATCGGCGGA
TCTTCCAAAA AGAAACGCGC ACCCCAGCCG GCCCCCGCAC CGGCGCCCTC CCGCCCTGTT
CCAGTCAAGA AAGAAGCTCT CGACTTGCTT TCCGGCAACA AGAAAAAAGC GTCGCGCGCC
GCTGACGCCG CTCCGGCGCC CGCCGCTGCC CCGGCCGCCG CAGAACCCGC CGCGCCCGCA
CCCCAGGAAG AACCCTCCGC AGACGATAAA ATCATCAACC TCAAGCCGCC CGTCTCCGTT
TCCGAGCTGG CGGGCATGCT GAAAGCCAAG CCCTTCCAAA TCATCAAGGA TCTGATGGGC
ATGGGCATCT TCGCCAACCC GAACACGCCG CTGGATGCGG ACGCCGTCAG TTCCATCTGC
GACCTCCACG GCTACACATT CGCCCGTGAA AAACGGGAAA AGGGCGGCGG CGTGAAAGCC
CAGCAGGAAC CCGTCAAGGA ACCGGAACCC GTGCCGGTGG TGGAAGAACC CAAAGCCACC
CTCATCACGC GCACGCCCAT CATCACCGTC ATGGGCCATG TGGACCACGG CAAAACATCC
CTGCTGGACT ACATCCGCAA AACGCGCGTG GCCAAGGGGG AAGCCGGGGG CATTACCCAG
CACATCGGCG CCTATACGGT TGACTACAAC GGCAGCACGC TCACCTTCCT GGATACGCCG
GGCCATGCCA TCTTCACGGA AATGCGCGCC CGCGGCGCGG ACGTCACGGA CATCGTGGTT
CTGGTGGTGG CCGCCAATGA CGGCATCATG CCCCAGACGC GGGAAGCCAT CGCCCACTCC
AAGGCAGCCG GCAAAACCAT CATCGTCGCC ATCAACAAAT GCGACCTTCC GGCCGCAGAC
CCCGTCAAGA CCAAGAGCGG CCTGATGGAA GAAGGGCTGG TTCCCACGGA CTTCGGAGGC
GATGTGGAAT GCGTGGAAGT CTCCGCCCTG ACCGGGGCCG GCATTGACGA CCTTCTCGGC
CTTCTCGTCC TCCAGTCAGA AGTGCTGGAA CTCCAGGCCA ACCCCAAGGC CAACTGCCGC
GCCTCCATCA TTGAGGCCCG CGTGGAACCC GGCACGGGCA GCTCCGCCAC GGCCATCGTG
GAAAGCGGCA CCATCCGCGT CGGAATGCCT TTCATCTGCG GCCCTTACGC CGGCAAGGTG
CGCGCCCTGG TCAACGACCA CGGCGAACGC GTCAAAAAGG TAGGGCCCGG CATGCCCGTG
GAAATCACCG GCTTCTCTGA AACCCCGAAC GTGGGGGACG AACTGGTGGA AATGGAAAAC
GAACGCGCCG CCAAAAAGCT TGGGGAAGAA CGCCAGGAGG AACTGCGCAA GCAGCGCCTG
GCCCAGCCCC GCAAGGCACG CATGGAAGAA CTGCTCGCCA TGATGGGGGA CGGCACCCAG
AAAGCCCAGC TCAAAATACT CCTGAAGGGG GATGTGCAGG GTTCCGTGGA AGCCATCAGG
AAAGCTGTTC TGGACATCCA GTCGGACAAA GTGGAATGCG TCTTCCTGAA CGCCTCCGCC
GGCCCCATCT CGGAATCGGA CGTTCTGCTG GCCTCCTCCT CGGACGCCGT CATCCTGGGC
TTCAACGTCA AGGTGGAAGC CAACGCCGTC AAACTGCTCA AGCGGGAAGG CGTGCAGGTA
AAACTGTATT CCATCGTTTA CGAACTCATT GACCAGGTGC GGGATGCCAT GCTGGGCCTT
CTGGAACCGG AAACGCGCGA AACCATCATC GGCCACGCCA AAGTGCTCCA GGTCTTCAAG
CTCAACAAGG GCCGTGCGGC AGGCTGCATG GTGGAGGACG GGAAAATCCT CCGCAGCTGC
GAGGCGCGCG TCATCCGCGA CAAGACGCCC GTCTTTGACG GTAAAATGTC CACCCTCCGC
CGCTTCCAGG ATGAAGTGGA AGAAGTCAAG GCAGGTCTGG AATGCGGCAT CCGCCTCGGA
GACTTCAACG AATACGAAAC GGGCGACATC ATCGAATGCT ACACGCTGGA AAAAATCCAG
CAAACGCTGT AA
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| Protein sequence | MPNKQEEKEP KKEVLDLIGG SSKKKRAPQP APAPAPSRPV PVKKEALDLL SGNKKKASRA
ADAAPAPAAA PAAAEPAAPA PQEEPSADDK IINLKPPVSV SELAGMLKAK PFQIIKDLMG
MGIFANPNTP LDADAVSSIC DLHGYTFARE KREKGGGVKA QQEPVKEPEP VPVVEEPKAT
LITRTPIITV MGHVDHGKTS LLDYIRKTRV AKGEAGGITQ HIGAYTVDYN GSTLTFLDTP
GHAIFTEMRA RGADVTDIVV LVVAANDGIM PQTREAIAHS KAAGKTIIVA INKCDLPAAD
PVKTKSGLME EGLVPTDFGG DVECVEVSAL TGAGIDDLLG LLVLQSEVLE LQANPKANCR
ASIIEARVEP GTGSSATAIV ESGTIRVGMP FICGPYAGKV RALVNDHGER VKKVGPGMPV
EITGFSETPN VGDELVEMEN ERAAKKLGEE RQEELRKQRL AQPRKARMEE LLAMMGDGTQ
KAQLKILLKG DVQGSVEAIR KAVLDIQSDK VECVFLNASA GPISESDVLL ASSSDAVILG
FNVKVEANAV KLLKREGVQV KLYSIVYELI DQVRDAMLGL LEPETRETII GHAKVLQVFK
LNKGRAAGCM VEDGKILRSC EARVIRDKTP VFDGKMSTLR RFQDEVEEVK AGLECGIRLG
DFNEYETGDI IECYTLEKIQ QTL
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