Gene Amuc_0942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0942 
Symbol 
ID6274223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1122373 
End bp1123245 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content57% 
IMG OID642612996 
Productglycosyl transferase family 11 
Protein accessionYP_001877555 
Protein GI187735443 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTTT TCGGAGGGCT GGGAAACCAG CTGTTCCAAT ACGCCTTCCT CTTCGCGCTC 
TCCCGGCAAG GGGGAAAAGC AAGACTGGAA ACCTCATCAT ATGAACATGA TGATAAGAGG
GTCTGCGAAC TCCATCACTT CCGGGTTTCC CTTCCCATTG AAGGAGGCCC TCCCCCCTGG
GCTTTCCGCA AGTCCCGTAT TCCCGCCTGC CTGCGTTCCC TGTTCGCCGC TCCCAAATAT
CCTCATTTCC GGGAGGAAAA ACGGCACGGG TTCGATCCCG GTCTCGCAGC TCCTCCCCGC
CGCCATACCT ATTTCAAGGG ATATTTTCAG ACGGAACAAT ACTTCCTCCA CTGCCGGGAA
CAGCTTTGCA GGGAATTCCG TCTGAAAACT CCCCTGACTC CGGAAAACGC CCGCATTCTT
GAAGATATCC GTTCATGCTG CTCCATTTCC CTGCACATCC GCAGAACGGA TTACCTCTCC
AACCCTTACC TTTCTCCGCC GCCTCTGGAA TACTACCTCC GGAGCATGGC TGAAATGGAA
GGAAGGCTGC GGGCGGCAGG CGCTCCGCAG GAATCCCTGC GTTACTTCAT CTTTTCGGAC
GACATAGAAT GGGCCCGGCA AAACCTGAGG CCCGCCCTGC CCCATGTCCA TGTGGATATC
AATGACGGCG GCACCGGCTA CTTCGATCTG GAACTGATGC GAAACTGCCG CCACCACATC
ATCGCCAACA GCACTTTCTC CTGGTGGGCG GCCTGGCTCA ACGAACACGC GGAGAAAATC
GTCATCGCGC CGCGCATCTG GTTCAACAGG GAGGAAGGCG ACCGGTACCA TACGGATGAC
GCGCTCATCC CCGGCTCATG GCTCCGGATA TAA
 
Protein sequence
MRLFGGLGNQ LFQYAFLFAL SRQGGKARLE TSSYEHDDKR VCELHHFRVS LPIEGGPPPW 
AFRKSRIPAC LRSLFAAPKY PHFREEKRHG FDPGLAAPPR RHTYFKGYFQ TEQYFLHCRE
QLCREFRLKT PLTPENARIL EDIRSCCSIS LHIRRTDYLS NPYLSPPPLE YYLRSMAEME
GRLRAAGAPQ ESLRYFIFSD DIEWARQNLR PALPHVHVDI NDGGTGYFDL ELMRNCRHHI
IANSTFSWWA AWLNEHAEKI VIAPRIWFNR EEGDRYHTDD ALIPGSWLRI