Gene Amuc_0909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0909 
Symbol 
ID6274258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1085664 
End bp1086779 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content56% 
IMG OID642612963 
Productprotein of unknown function UPF0027 
Protein accessionYP_001877522 
Protein GI187735410 
COG category[S] Function unknown 
COG ID[COG1690] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACCA TTGACGGAAA ATACACGGAA GCCCGCGTGT TCACGGATGA ACTGGAAGAC 
CTGGCCCGCA CCCAGATCAG GGACGTCTGC AACCACCCCG CCTTTGAAGG AAGCCGGGTG
CGCATCATGC CGGACGTGCA CGCCGGAGCC GGCTGCGTCA TCGGGTTCAC GGCGGAATTG
AAAACGGATA AGGTAATTCC CAACCTGATC GGCGTGGATA TCGGCTGCGG AGTGCTTACC
GCCAGACTGT CCGGACTGCC GGATTTTTCC AGCTTTGACG CACGCCTGCG CGAGCGCGTC
CCATCCGGGA TGCATGCCCG TCCCTCCGTT CATCAAGCCT TGCTGGACGA CCCGGAACTG
GATGAAGAAA TCTCCCGCAT CTGCATGGAC GTGCTGAGAA CGGACAAAGA CAGGCACCGC
CGCTCCGTAG GGTCTCTGGG AGGAGGCAAC CACTTCATTG AAATAGCGCA AGGGAAAGAG
CACGCTTTCC TGTGCATCCA CTCCGGTTCC CGCAATTTCG GTCTGAAGAT TGCGGAACGC
TACCAGAAAA TCGCCGTGGA TACTTGTCCG GACGCCTATC TTAAAGAACG CAAGAAAGGA
CTCTGCTACC TTCAGGGAGA AAATACGCTG AACTACATGC GGGATATGAA GGTGGCTCAG
CGCTTCGCAG CCCTGAACCG CCGCGTGATA CTGCATGAAC TGCTGGATGA TGCAGCTGAT
CTGGAAAGTT TCGACACCGT GCACAACTAC ATTGCGGAAG ACCAAATCAT CCGCAAGGGA
GCCGTCCGGG CCGGACGCGG AGAAAAACTC ATCGTTCCCC TGAATATGCG TGACGGCTCC
GTCATCTGCA TCGGCAAAGG AAATGAAGAA TTCAATTCCT CATCTCCGCA CGGCGCAGGC
CGCAGCATGT CCCGCAAAAA GGCTAAAGCC AATCTTTCCC TGGAGGAATT CGAGGCTTCC
ATGCAGGGTA TTTTCTCCAC CTGCGTTTCC CGCGCTACGC TGGATGAAGC GCCAATGGCC
TACAAGGATG GCGAGAGCGT GCTGGACAAC ATCCATGAAA CGGCGGAAAT CGTGGAACGC
ATCAGGCCCG TATATAACTT CAAGGCACCC GAATAG
 
Protein sequence
MITIDGKYTE ARVFTDELED LARTQIRDVC NHPAFEGSRV RIMPDVHAGA GCVIGFTAEL 
KTDKVIPNLI GVDIGCGVLT ARLSGLPDFS SFDARLRERV PSGMHARPSV HQALLDDPEL
DEEISRICMD VLRTDKDRHR RSVGSLGGGN HFIEIAQGKE HAFLCIHSGS RNFGLKIAER
YQKIAVDTCP DAYLKERKKG LCYLQGENTL NYMRDMKVAQ RFAALNRRVI LHELLDDAAD
LESFDTVHNY IAEDQIIRKG AVRAGRGEKL IVPLNMRDGS VICIGKGNEE FNSSSPHGAG
RSMSRKKAKA NLSLEEFEAS MQGIFSTCVS RATLDEAPMA YKDGESVLDN IHETAEIVER
IRPVYNFKAP E