| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0886 |
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| Symbol | |
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| ID | 6274281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 1055187 |
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| End bp | 1056161 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642612941 |
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| Product | Transketolase central region |
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| Protein accession | YP_001877500 |
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| Protein GI | 187735388 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0973898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 77 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTAA CATACATTGA TGCCATCCAC GACGCCCAGA AAGACCTGCT TACGGAAGAC
AGGGACGTCT TTCTGTACGG GCAGGACATA GGCGTTTTCG GCGGCGCATT CAAAGCGACC
AAGGGCCTCA AGGAGCTGTT CCCGGACCGG GTGATTGACG CCCCCATCAG TGAGGACGCC
ATGGCCGGCA TGGTGACCGG GGCCGCCGTC ATGGGCAAGA AGCCCATTAT GGAAGTCCAG
TTTGCCGACT TCAGCACGAT CGCTTTCAAC CAGATTGTCA ACATGGCGGC CACCCATTAC
TACCGCACGG GCATTCCCGC CAACATCACG GTGCGCCTGC CCTGCGGGGG AACCCCCGGC
ACCGGCCCTT TCCACAGCCA GAGCCTGGAA GCCTTGTTCG CCCATTATCC GGGCCTGCAC
GTCATGACTC CGGCCACGGT AGCGGATGCT TACTGGATGC TGCGCCAGGC CGTGGAAATT
CCGGACCCCG TCATTTTTCT GGAGCACAAG TTCCTGTACC GCTGGCTGAA GGCGGAGGAC
AACTACCGGG AGGCCCCGGT CATCCCGTTC GGCACGGCCC GGATCGCCCG CACGGGGAAG
CATGCCACCG TGGTGGCGTA CAGCGCCATG GTGCCGGAAG CCGTGCGCGC GGCGGACCTG
CTTGAGAAGG AAAGCGGCTA TGAAGTGGAG GTCGTGGATC TTCGGACGGT GCGCCCGCTG
GACATGGATA CCGTTATCGC CTCCGTAGCG CGCACCGGCC GCGTCCTGGT CGTCGGGGAA
GATTTTCCGT GGGGAGGCGT CACGGCGGAA GTTGTTTCAC GCATTGTCGC GGAAGGCTTC
CACCTGCTGG ATGCCCCGCC CCAGAGGCTC AACGCACGGG ATACCCCCAT CCCCCAGCAC
CCCAACCTCT GGAAGGCGCA CCGCCCCACG CTGGAATCCA TTGCCGCCTC CATCCGCCAT
CTTCTATCCA TTTGA
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| Protein sequence | MSVTYIDAIH DAQKDLLTED RDVFLYGQDI GVFGGAFKAT KGLKELFPDR VIDAPISEDA
MAGMVTGAAV MGKKPIMEVQ FADFSTIAFN QIVNMAATHY YRTGIPANIT VRLPCGGTPG
TGPFHSQSLE ALFAHYPGLH VMTPATVADA YWMLRQAVEI PDPVIFLEHK FLYRWLKAED
NYREAPVIPF GTARIARTGK HATVVAYSAM VPEAVRAADL LEKESGYEVE VVDLRTVRPL
DMDTVIASVA RTGRVLVVGE DFPWGGVTAE VVSRIVAEGF HLLDAPPQRL NARDTPIPQH
PNLWKAHRPT LESIAASIRH LLSI
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