| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0864 |
|---|
| Symbol | |
|---|
| ID | 6274304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | - |
|---|
| Start bp | 1032239 |
|---|
| End bp | 1033957 |
|---|
| Gene Length | 1719 bp |
|---|
| Protein Length | 572 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642612919 |
|---|
| Product | sulfatase |
|---|
| Protein accession | YP_001877478 |
|---|
| Protein GI | 187735366 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2194] Predicted membrane-associated, metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.218457 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 72 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCCTC CCCATGCATC CGCCGGTTCC GCAGAACGGT ATCCGTCCGC ATACGGCCTG
TCGGCCGCTG TCTGCCAGGC TCTGCGCGCC GCGTTCATTC CCCGCCGCAT GCGCTGCCTG
TGGGCAGCCG GGCTTGCGGC GGCGCTGGCG GCCAATCCCT ATGTGCTCAA CGATGGCCAA
AGCCTGCTGA TGAGCAGCAT GGGCATCGCC TGCTCCGCAT CCCTGCTCTG CGGCACCATT
CTTCTCTGCC TGAAATACCG CTTCACCGCC TATGTCCTTC TTCCCGCCAT CATTCTGTTC
AATGCGGGCC TGTACATGAT GCAGATGCGG TACGGATTGG TCCTGAACCT TTCCGTGCTT
TCCAGCATGG CGGAGACCAA TTTCCAGGAA GCCTGCGCCT TCTGCACCCC CGCTTCCATT
GCAGGAACCC TGCTTCTGGC CGGGTTTATC TACCTGGCCA TCTACTGGAG CCGCCGTTCC
CTGCGTCAAA AAGCCACGTG GGGTGCACTG GCATGCATTT GGGGCCTGTA CGCGGCCCTT
CTGCTGCTGA GCATTCCGGC AGCCTCCTAC AGCTTGGAAC CCCTTTATCT TTACTACACG
TCTGACAAGG CCAAAGGCTG GCCTCTCGTG GATATTGCAA TGACGTGCAA ACTGGCGGAC
GAATACATCA CCCAGGATGC GGGGCGTTTC AACACATTGC GGAATCTTCC GTCCTGCGCG
GAGCCCCTTT CCCAGTGCGA AGCCCCAGAC GACCTGGCCG TGGTTTTCCA CATGGGGGAG
AGTGTCCGGG GGGACCATCT TCCCCTGAAC GGTTACCATC GGAACACAAT GCCCCGGCTT
TCCAAAGAAC CCAACGTCGT TTCCTTCCCG CATGCCACTT CCTTTGGCAT CGTGACCAGA
ATTTCCGCCA TCGGCATGTT TACGGATGCG GAACTGTGCC GCCGCACTCC CGGTCACTCC
TCCTTCATTG ACCTGTTCAA CAAACACGGA TTCCGCACCG TCCGTATCAT GGACCTGAGC
GGAGATTCCA TTCATGATTA TTCCCTGGGC ATCCTGACAC GGAACTGCCG TGAACGGAGA
CAGACGCCGC TCCAGCACCA GACGCCCGGA ATGATGCAGG AACGAACTTC CCTGGTCATG
GAGGAATCCC TGAAAAACTT CGGCCGCAAC AGGCAGCTTT ATATCATTTA CAATAACGGG
AGCCATATGG CGTTCAGCTA CCCCGCGCAG GCGGAATGTT TTACCCCGGC ATCCTGCAAT
ATGGACGACC CCAAGGCCCG TCTGGAAGAA ACCGTCAATG CCTATGACAA TTCCATCGTC
GACCTGGATG CCTCCATTCA CCGCATGATT GCACTGTTGA AGAACAGGCC CGCCATTTAT
TTTTACTGCT CCGACCACGG CGTAGCGCTG GGAGAGGAAG GAAAAATGTT CCAGGGCCAT
ATCCTGCCGC CTGTTTACCG GCCTGCCATG TTCATCTGGT ATTCGGACAC CTTCGCCTCA
CGCTATCCGG ACATGGTGCG CGCCCTGAAA GCCAACCGGC TGAAAGCCGT CTCCCACGAC
CACATCTTCC ATACCCTTCT TTCCCTGGCT TCCATCCGGT CGGAAATCGT CAGGAACGAC
CTGAATCTGG CTTCTCCGGA CGCGCGGGAA ACTCCGGCCC CCCTCCAGCC GGAAACGCTG
GCGGAATGGC TGCCCATTCC CGCACCGCCG CAGCCGTAA
|
|---|
| Protein sequence | MIPPHASAGS AERYPSAYGL SAAVCQALRA AFIPRRMRCL WAAGLAAALA ANPYVLNDGQ
SLLMSSMGIA CSASLLCGTI LLCLKYRFTA YVLLPAIILF NAGLYMMQMR YGLVLNLSVL
SSMAETNFQE ACAFCTPASI AGTLLLAGFI YLAIYWSRRS LRQKATWGAL ACIWGLYAAL
LLLSIPAASY SLEPLYLYYT SDKAKGWPLV DIAMTCKLAD EYITQDAGRF NTLRNLPSCA
EPLSQCEAPD DLAVVFHMGE SVRGDHLPLN GYHRNTMPRL SKEPNVVSFP HATSFGIVTR
ISAIGMFTDA ELCRRTPGHS SFIDLFNKHG FRTVRIMDLS GDSIHDYSLG ILTRNCRERR
QTPLQHQTPG MMQERTSLVM EESLKNFGRN RQLYIIYNNG SHMAFSYPAQ AECFTPASCN
MDDPKARLEE TVNAYDNSIV DLDASIHRMI ALLKNRPAIY FYCSDHGVAL GEEGKMFQGH
ILPPVYRPAM FIWYSDTFAS RYPDMVRALK ANRLKAVSHD HIFHTLLSLA SIRSEIVRND
LNLASPDARE TPAPLQPETL AEWLPIPAPP QP
|
|---|
| |