| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0858 |
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| Symbol | |
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| ID | 6274311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 1022954 |
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| End bp | 1024396 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642612913 |
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| Product | cyclic nucleotide-binding protein |
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| Protein accession | YP_001877472 |
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| Protein GI | 187735360 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.638136 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCATTG AACAGGAAGA ATTCCAGAAA AAACTAAAAC GCATCAATCT GGCGTACTTC
TCCGATCCGG ACCGCATTAT TACCATCAGC AGGGGAAACA GCGTCGTCCG CCAGGGGGAA
CAGAACAAAA GGCTTTACCT GATTTTATCC GGCAGCGTGG TTTCCTACCG CCACGTCGTT
AAAGAAGACC CGGAAACAGC TTCCACTTCC CACAAAATCT ACAAGGCGTT CCGGGCCGGT
CCCGGAGACT ATTTGGGAGT GCAGAGTTTC TTTTCCGGAT GGTTCCGCAG CTCCTCCGAT
CTCATTGCGG AAACTGATTT GGAACTGGCC TATATCGACA CCGCCACCCC TGCCGTGGAC
GTGGAACACT ACGGCACGCT CCTGGAACAG TTTGTTCCCG CCATTGTCCA TGAACTGGCG
GCGCGCAATA CCCGCGTCTT TGACCGCACT GCGGAAAAGG AAGAAGCGCT GCGGATGCTC
CACCGTTCTG AAATGGCCGC CACCCTGGGG CAATTATCCG CTGGAATAGC CCATGAGCTC
AACAATTCCC TGGGAGTCCT GTCCCGTAAA ACAGACTTTG TTCTGGAAAC CCTGGACAAC
ATGTTCCGCC AGGAAAACGC CTTCCGCTAC ACCCTGTACA ACAAAGGGTT GGAAGGGGCT
TCCTCCTCAT CCACTTCCGA ACAGCGCAGG CTGGCGCGCC AGTTTGAAAA AAATTACGGG
CTTTCCCAGG ACGTGGCCAA GGCCCTGGCC CTGATTCCGG ACATACAGAA TCAGCCGGAG
CTGCTGAACA AGCCATTCCT CAGCCAGCTG GAACAAAACC TCCCTTATTG GGAATTGGGA
CACGACCTGC ACGATATGAA ACTGGCTGTC AGGCATGCTA CAGCCATTGT CCGTTCCGTT
CGCCTGCTGG GAGGAGGCAA CACCAGACGG GAAGAAGGCG TAAACGTGAC GGACTCCCTT
ACGGAAGCTG TTGCTCTGGT CAAGTCCAGT CTGCGAGGCG TTGATTTTGA AATGGTCCTG
CCTCCCAGAG ACTCCGTGCC CGGCATCTTC GCAGATATGA CGGAGCTCGT TCAAATTTGG
ATCAACCTGC TTCAAAACGC CTGCGACGCG CTGAAAATAG AAAATACCCC CAACCCTTCC
ATCCACGTAG AATGCCGGGT GGAAAAAATC AGCAGCAAGG ACCAGACATC CCATACCACC
CGTGAAATTC TGGTCTCCGT CACAGACAAT GGCCCCGGCG TCCCAAAGGA CCTGCATGAA
AAAATTTTCC GTCCCAACTT CACTACCAAA AAGAAAGGTC TTTCCTTCGG CCTGGGGCTG
GGGCTCACCA TCGTCCGGCG CATTGTGGAC AGCTACGGCG GCCGCATCCG CCTGGAGAGC
GTTCCGGGCC ATACCGTTTT TACGATAGTC ATACCAACCA TCAACAATCA TGGAAAAAAT
TAA
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| Protein sequence | MIIEQEEFQK KLKRINLAYF SDPDRIITIS RGNSVVRQGE QNKRLYLILS GSVVSYRHVV
KEDPETASTS HKIYKAFRAG PGDYLGVQSF FSGWFRSSSD LIAETDLELA YIDTATPAVD
VEHYGTLLEQ FVPAIVHELA ARNTRVFDRT AEKEEALRML HRSEMAATLG QLSAGIAHEL
NNSLGVLSRK TDFVLETLDN MFRQENAFRY TLYNKGLEGA SSSSTSEQRR LARQFEKNYG
LSQDVAKALA LIPDIQNQPE LLNKPFLSQL EQNLPYWELG HDLHDMKLAV RHATAIVRSV
RLLGGGNTRR EEGVNVTDSL TEAVALVKSS LRGVDFEMVL PPRDSVPGIF ADMTELVQIW
INLLQNACDA LKIENTPNPS IHVECRVEKI SSKDQTSHTT REILVSVTDN GPGVPKDLHE
KIFRPNFTTK KKGLSFGLGL GLTIVRRIVD SYGGRIRLES VPGHTVFTIV IPTINNHGKN
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