Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0857 |
Symbol | |
ID | 6274312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 1022488 |
End bp | 1022967 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642612912 |
Product | response regulator receiver protein |
Protein accession | YP_001877471 |
Protein GI | 187735359 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.60456 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAAAA TTAACATCAT TTGCGTGGAC GACCAGCCGG AAGTCCTGGA CAGCGTTTTG CGCGACCTTC GTCCGCTGAA TTCCTGCTTC CGCCTGGAAG GGGTGGAATC CGCATCCGAA TGCCGCGAGC TATTGGAAGA ATTCGACCAG GACGGAGAAC TGACGGGACT GATTATTTCC GACCACGTCA TGCCGGGAGG TTCAGGAGTA GAATTGCTTG GAGGCATCGC CAAAGACGAC CGTTTTGCCG GGACACGCAA AATCCTGCTG ACCGGCCAGG CCACCCACGC GGACACCATC CAGGCCGTCA ATGACGCACA CATTGACAAC TATCTGGAAA AACCCTGGGA TCCCGCCGTT CTCCTTGCGA CCGCCCGCAA ACTGCTGACC AGGTTCATCA TGGACAAGGG CATCGACCAC ATGCCCTATA TGTCCTGCCT GGACCAGGCC ACTCTGCTGG ATTACCTGCG GAGAAACTGA
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Protein sequence | MEKINIICVD DQPEVLDSVL RDLRPLNSCF RLEGVESASE CRELLEEFDQ DGELTGLIIS DHVMPGGSGV ELLGGIAKDD RFAGTRKILL TGQATHADTI QAVNDAHIDN YLEKPWDPAV LLATARKLLT RFIMDKGIDH MPYMSCLDQA TLLDYLRRN
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