Gene Amuc_0857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0857 
Symbol 
ID6274312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1022488 
End bp1022967 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content56% 
IMG OID642612912 
Productresponse regulator receiver protein 
Protein accessionYP_001877471 
Protein GI187735359 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.60456 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAA TTAACATCAT TTGCGTGGAC GACCAGCCGG AAGTCCTGGA CAGCGTTTTG 
CGCGACCTTC GTCCGCTGAA TTCCTGCTTC CGCCTGGAAG GGGTGGAATC CGCATCCGAA
TGCCGCGAGC TATTGGAAGA ATTCGACCAG GACGGAGAAC TGACGGGACT GATTATTTCC
GACCACGTCA TGCCGGGAGG TTCAGGAGTA GAATTGCTTG GAGGCATCGC CAAAGACGAC
CGTTTTGCCG GGACACGCAA AATCCTGCTG ACCGGCCAGG CCACCCACGC GGACACCATC
CAGGCCGTCA ATGACGCACA CATTGACAAC TATCTGGAAA AACCCTGGGA TCCCGCCGTT
CTCCTTGCGA CCGCCCGCAA ACTGCTGACC AGGTTCATCA TGGACAAGGG CATCGACCAC
ATGCCCTATA TGTCCTGCCT GGACCAGGCC ACTCTGCTGG ATTACCTGCG GAGAAACTGA
 
Protein sequence
MEKINIICVD DQPEVLDSVL RDLRPLNSCF RLEGVESASE CRELLEEFDQ DGELTGLIIS 
DHVMPGGSGV ELLGGIAKDD RFAGTRKILL TGQATHADTI QAVNDAHIDN YLEKPWDPAV
LLATARKLLT RFIMDKGIDH MPYMSCLDQA TLLDYLRRN