| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0810 |
|---|
| Symbol | |
|---|
| ID | 6274367 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | - |
|---|
| Start bp | 952283 |
|---|
| End bp | 953746 |
|---|
| Gene Length | 1464 bp |
|---|
| Protein Length | 487 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642612860 |
|---|
| Product | 2-alkenal reductase |
|---|
| Protein accession | YP_001877424 |
|---|
| Protein GI | 187735312 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 0.810469 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGACGG TTATGATGAC CGTGGTCTCC GTTGCCTATT GGAGATGGAA CAGTCGTGTT
ACGGAGAAGA ATGTTTCCTT CCGGTCGGAA GTGTTTACCC TGGCCCAGCA GCCCGAATTG
AAGGAGGAGG ATATTCCTGT TTTGCACCAG CTCAATGAGG AATATTCACG CGTTGCCCGG
CTGGTGGAAC GGGTATTGGT CAGCATAGAC ACTACAGGCG TGACAAGCGT TCCTCAGCCT
TCCGAGGATG GTGATTTCAT GGTTGAAAAG AGGCTGACGG TTCATGGTTT GGGTTCCGGC
GTCATTGTTA CTGAAGAAGG GCATATTATT ACCGCCTACC ATGTCATTCA GAACAAGCAT
GCGCTGCGCG TTACGCTGAG CAATGGGAAA AGCGTTTCCG TACGCCTGGT AGGGGTGGAT
CCGGAATTGG ATATCGCCGT GCTGCAGGTA GAAAACCCGA TGACGTTTAC CCCCCTTCCG
TTCGGCAACA GTGATGAAAT TGCGCCCGGC ATGATTGTTC TGGCATGCGG CAATCCCTAT
GGGCTGGGCA CGACTGTTTC CCGCGGCATT ATCAGTGCCC GTGAACGCAA GCTGGTGGAT
TCCGGCATTA ACTTGATCCA GACGGATGCC AGTATCTTCC CGGGGAATTC GGGAGGCCCC
CTCATCAACA TCCGCGGGGA AATCATCGGC ATCAATAAAT CGGTGCTTCC CAATGCGGAG
AAAAATTACG CCGGCATTGG GTTTGCCATT CCCTCCAATC TGGTGATGCA CAGCTTTGAG
CAGATTTGCA AACATGGCCG CCCCATGAAA GGGTATCTGG GATTGGACAT TGTGCGCAAT
ACTCCCCCGC TTCGCAGCTT CCTGGATTAT CATGAGGCGG GAGGCGCAGT AATCAACATC
GTGAAGCATG GTTCCCCGGC GGAGCAGGCA GGCCTTCAAA CAGGTGACGT AATACTGAGT
TTCAACGAAG TCCCCATCCA GACGGATGAG GAAGTGAAGG AACGCATTGA AAATCTTTCC
ATCGGCGACA AGTTCCGGCT GAAAGTCTGG CGCAAAGGGC AAAAAATGAA CGTCACCCTG
AAGGTGGGAG ATAGTATTTT AAAAAATGTT CCTTCTCCTT GGGAAGACTT CATGGAAGGA
GTGGGAATGC ATTTGCGTGA ACTGACTGCG GAAGAACAAT CCATAGGTGC TCGGGGGTTG
CTGGTCATTC AAGTGAATCC GAAGAAATCC GTGGGGCAGA TATTGCAGGC CGGCGACATG
GTCTTTGCCG TAAACCACCA GAGTGTCAGC ACCAAGGAAG CCTTGGTCAA AGCTCTTAGG
GAAGGGCCGG CATTGCTGAC CGTTTCCCGC GATGGGCAGC AATTCAATGT GAAAGTGGAT
GCGCGCCCCG TTTCTGAAAA AACATTGCTT CCCCGCATTC CGGAGGCGAC AAAAGGCAAC
GCCATCATAC CGCACGAGCT TTGA
|
|---|
| Protein sequence | MMTVMMTVVS VAYWRWNSRV TEKNVSFRSE VFTLAQQPEL KEEDIPVLHQ LNEEYSRVAR
LVERVLVSID TTGVTSVPQP SEDGDFMVEK RLTVHGLGSG VIVTEEGHII TAYHVIQNKH
ALRVTLSNGK SVSVRLVGVD PELDIAVLQV ENPMTFTPLP FGNSDEIAPG MIVLACGNPY
GLGTTVSRGI ISARERKLVD SGINLIQTDA SIFPGNSGGP LINIRGEIIG INKSVLPNAE
KNYAGIGFAI PSNLVMHSFE QICKHGRPMK GYLGLDIVRN TPPLRSFLDY HEAGGAVINI
VKHGSPAEQA GLQTGDVILS FNEVPIQTDE EVKERIENLS IGDKFRLKVW RKGQKMNVTL
KVGDSILKNV PSPWEDFMEG VGMHLRELTA EEQSIGARGL LVIQVNPKKS VGQILQAGDM
VFAVNHQSVS TKEALVKALR EGPALLTVSR DGQQFNVKVD ARPVSEKTLL PRIPEATKGN
AIIPHEL
|
|---|
| |