Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0741 |
Symbol | |
ID | 6273769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 876739 |
End bp | 877494 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 642612792 |
Product | protein of unknown function DUF88 |
Protein accession | YP_001877358 |
Protein GI | 187735246 |
COG category | [S] Function unknown |
COG ID | [COG1432] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 0.614685 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTTC ATAGGATAGT TGTTCTCATT GATGCTGATA ATACCAATCT AGCTAATCTT GAAAAACTCA TACAATACAT ATCCACTCGT GGACGTATTG TGGTCAAAAG AGCTTACGGT AATTGGAGTG AAAATTTAAA GGATAAGAAA TCTGCACTAC AACAGTCTGG TTTTAAAACA GAGCATTATT TCAATTGTGT TCCCGGAAAA AATGCAACAG ATATAGCATT AGCTATCGAC GCCGTAGATT TATTACATAA AAATTCTTAC GACTCCTTTG TTATTGTTTC AAGTGATAGT GATTTTACAC CTCTTTCTAT CTACCTTAAA GAATCAGGAG TTTATGTAAT AGGATTTGGA AAAAGCAATG CTTCTGAAGC TTTTAGAAAC GGCTGTGATG AATTTAAAGA TATAGAAAAA ATTCCTACTA GTGAATCAAA TTCTCAACAT TTGAAGAATA CCGCCCCGTC TGCAACAAAA AAAGATCCTT TAGAGATAAT CCATAAACAT CTTCAACAAT GTGCGATAGA TAATAAGAAA GACGATGGGT ACACATCTGC AAGCGATGCT GGTAAATATC TTCGACAGCA CATCCTTGGT TTTACTCCAA AAACCTATGG ATACAAGAAT CTTACTAATC TTTTAGAAGA CTTTCGCAAT CTCTATGCTA TTGAAAAACA TCCAATTCCC GGTAATAAAA ACTCTGTTAA TGTTAGCTAT AAACTCTGTA ACTCTACAAA CAATTCAGAA TCCTGA
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Protein sequence | MKFHRIVVLI DADNTNLANL EKLIQYISTR GRIVVKRAYG NWSENLKDKK SALQQSGFKT EHYFNCVPGK NATDIALAID AVDLLHKNSY DSFVIVSSDS DFTPLSIYLK ESGVYVIGFG KSNASEAFRN GCDEFKDIEK IPTSESNSQH LKNTAPSATK KDPLEIIHKH LQQCAIDNKK DDGYTSASDA GKYLRQHILG FTPKTYGYKN LTNLLEDFRN LYAIEKHPIP GNKNSVNVSY KLCNSTNNSE S
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