Gene Amuc_0741 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0741 
Symbol 
ID6273769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp876739 
End bp877494 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content34% 
IMG OID642612792 
Productprotein of unknown function DUF88 
Protein accessionYP_001877358 
Protein GI187735246 
COG category[S] Function unknown 
COG ID[COG1432] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.614685 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTC ATAGGATAGT TGTTCTCATT GATGCTGATA ATACCAATCT AGCTAATCTT 
GAAAAACTCA TACAATACAT ATCCACTCGT GGACGTATTG TGGTCAAAAG AGCTTACGGT
AATTGGAGTG AAAATTTAAA GGATAAGAAA TCTGCACTAC AACAGTCTGG TTTTAAAACA
GAGCATTATT TCAATTGTGT TCCCGGAAAA AATGCAACAG ATATAGCATT AGCTATCGAC
GCCGTAGATT TATTACATAA AAATTCTTAC GACTCCTTTG TTATTGTTTC AAGTGATAGT
GATTTTACAC CTCTTTCTAT CTACCTTAAA GAATCAGGAG TTTATGTAAT AGGATTTGGA
AAAAGCAATG CTTCTGAAGC TTTTAGAAAC GGCTGTGATG AATTTAAAGA TATAGAAAAA
ATTCCTACTA GTGAATCAAA TTCTCAACAT TTGAAGAATA CCGCCCCGTC TGCAACAAAA
AAAGATCCTT TAGAGATAAT CCATAAACAT CTTCAACAAT GTGCGATAGA TAATAAGAAA
GACGATGGGT ACACATCTGC AAGCGATGCT GGTAAATATC TTCGACAGCA CATCCTTGGT
TTTACTCCAA AAACCTATGG ATACAAGAAT CTTACTAATC TTTTAGAAGA CTTTCGCAAT
CTCTATGCTA TTGAAAAACA TCCAATTCCC GGTAATAAAA ACTCTGTTAA TGTTAGCTAT
AAACTCTGTA ACTCTACAAA CAATTCAGAA TCCTGA
 
Protein sequence
MKFHRIVVLI DADNTNLANL EKLIQYISTR GRIVVKRAYG NWSENLKDKK SALQQSGFKT 
EHYFNCVPGK NATDIALAID AVDLLHKNSY DSFVIVSSDS DFTPLSIYLK ESGVYVIGFG
KSNASEAFRN GCDEFKDIEK IPTSESNSQH LKNTAPSATK KDPLEIIHKH LQQCAIDNKK
DDGYTSASDA GKYLRQHILG FTPKTYGYKN LTNLLEDFRN LYAIEKHPIP GNKNSVNVSY
KLCNSTNNSE S